Curated BLAST
Searching in Burkholderia phytofirmans PsJN (BFirm)
Found 14 curated entries in PaperBLAST's database that match '1.2.1.41' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Burkholderia phytofirmans PsJN, or try another query
BPHYT_RS16770: gamma-glutamyl phosphate reductase is similar to: | PaperBLAST |
PROA_ECOLI / P07004: Gamma-glutamyl phosphate reductase; GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase; EC 1.2.1.41 from Escherichia coli ProA / b0243: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Escherichia coli proA / P07004: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Escherichia coli | 47% id, 98% cov |
A7Y114: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Halobacillus halophilus | 44% id, 96% cov |
Echvi_2633: gamma-glutamylphosphate reductase (EC 1.2.1.41) from Echinicola vietnamensis | 37% id, 100% cov |
PROA_YEAST / P54885: Gamma-glutamyl phosphate reductase; GPR; Glutamate-5-semialdehyde dehydrogenase; GSA dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; EC 1.2.1.41 from Saccharomyces cerevisiae | 38% id, 93% cov |
P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana | 36% id, 57% cov |
P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa | 34% id, 57% cov |
P5CS_HUMAN / P54886: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC 2.7.2.11; EC 1.2.1.41 from Homo sapiens ALDH18A1 / P54886: δ-1-pyrroline-5-carboxylate synthase (EC 1.2.1.41; EC 2.7.2.11) from Homo sapiens | 38% id, 50% cov |
P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa Q941T1: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Oryza sativa | 34% id, 55% cov |
P5CS_MOUSE / Q9Z110: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC 2.7.2.11; EC 1.2.1.41 from Mus musculus Q9Z110: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Mus musculus | 37% id, 50% cov |
More... |
BPHYT_RS17110: glutamate 5-kinase is similar to: | PaperBLAST |
P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa Q941T1: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Oryza sativa | 30% id, 50% cov |
P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana | 35% id, 39% cov |
P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa | 34% id, 39% cov |
P5CS_HUMAN / P54886: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC 2.7.2.11; EC 1.2.1.41 from Homo sapiens ALDH18A1 / P54886: δ-1-pyrroline-5-carboxylate synthase (EC 1.2.1.41; EC 2.7.2.11) from Homo sapiens | 36% id, 36% cov |
P5CS_MOUSE / Q9Z110: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC 2.7.2.11; EC 1.2.1.41 from Mus musculus Q9Z110: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Mus musculus | 33% id, 36% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
3878205-3879560 (frame -2) on NC_010681 is similar to: | PaperBLAST |
P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa Q941T1: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Oryza sativa Also see hits to annotated proteins above | 29% id, 53% cov |
P5CS_MOUSE / Q9Z110: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC 2.7.2.11; EC 1.2.1.41 from Mus musculus Q9Z110: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Mus musculus Also see hits to annotated proteins above | 32% id, 43% cov |
P5CS_HUMAN / P54886: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC 2.7.2.11; EC 1.2.1.41 from Homo sapiens ALDH18A1 / P54886: δ-1-pyrroline-5-carboxylate synthase (EC 1.2.1.41; EC 2.7.2.11) from Homo sapiens Also see hits to annotated proteins above | 34% id, 38% cov |
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory