Curated BLAST
Searching in Burkholderia phytofirmans PsJN (BFirm)
Found 21 curated entries in PaperBLAST's database that match '2.1.1.13' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Burkholderia phytofirmans PsJN, or try another query
BPHYT_RS02305: methionine synthase
is similar to: | PaperBLAST |
METH_ECOLI / P13009: Methionine synthase; 5-methyltetrahydrofolate--homocysteine methyltransferase; Methionine synthase, vitamin-B12-dependent; MS; EC 2.1.1.13 from Escherichia coli
MetH / b4019: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli
metH: methionine synthase; EC 2.1.1.13 from Escherichia coli
metH / P13009: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli
P13009: methionine synthase (EC 2.1.1.13) from Escherichia coli | 62% id,
72% cov |
METH_RAT / Q9Z2Q4: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Rattus norvegicus
Q9Z2Q4: methionine synthase (EC 2.1.1.13) from Rattus norvegicus | 54% id,
72% cov |
METH_HUMAN / Q99707: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Homo sapiens
MTR / Q99707: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Homo sapiens | 54% id,
72% cov |
PGA1_c13350 / I7EYQ6: methionine synthase B12-binding subunit (EC 2.1.1.13) from Phaeobacter inhibens
PGA1_c13350: Methionine synthase component, B12 binding and B12-binding cap domains (EC:2.1.1.13) from Phaeobacter inhibens | 34% id,
85% cov |
metH / Q8NQD1: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Corynebacterium glutamicum | 31% id,
70% cov |
DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris | 29% id,
62% cov |
Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima | 24% id,
60% cov |
DvMF_0476: vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) from Desulfovibrio vulgaris | 33% id,
25% cov |
Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima | 33% id,
22% cov |
More... |
BPHYT_RS02310: 5-methyltetrahydrofolate--homocysteine methyltransferase
is similar to: | PaperBLAST |
PGA1_c13370 / I7EW88: methionine synthase S-methyltransferase subunit (EC 2.1.1.13) from Phaeobacter inhibens
PGA1_c13370: Methionine synthase component, methyltransferase domain (EC:2.1.1.13) from Phaeobacter inhibens | 28% id,
86% cov |
METH_ECOLI / P13009: Methionine synthase; 5-methyltetrahydrofolate--homocysteine methyltransferase; Methionine synthase, vitamin-B12-dependent; MS; EC 2.1.1.13 from Escherichia coli
MetH / b4019: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli
metH: methionine synthase; EC 2.1.1.13 from Escherichia coli
metH / P13009: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli
P13009: methionine synthase (EC 2.1.1.13) from Escherichia coli | 61% id,
27% cov |
METH_HUMAN / Q99707: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Homo sapiens
MTR / Q99707: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Homo sapiens | 57% id,
27% cov |
METH_RAT / Q9Z2Q4: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Rattus norvegicus
Q9Z2Q4: methionine synthase (EC 2.1.1.13) from Rattus norvegicus | 59% id,
26% cov |
DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris | 35% id,
36% cov |
DvMF_0476: vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) from Desulfovibrio vulgaris | 34% id,
35% cov |
Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima | 30% id,
37% cov |
metH / Q8NQD1: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Corynebacterium glutamicum | 36% id,
25% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory