Curated BLAST for Genomes


Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 26 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS26655: 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
is similar to:

MetE / b3829: cobalamin-independent homocysteine transmethylase (EC from Escherichia coli
metE: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; EC from Escherichia coli
metE / P25665: cobalamin-independent homocysteine transmethylase (EC from Escherichia coli
P25665: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC from Escherichia coli

57% id,
99% cov

METE1_ARATH / O50008: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1; Cobalamin-independent methionine synthase 1; AtMS1; Vitamin-B12-independent methionine synthase 1; EC from Arabidopsis thaliana
O50008: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC from Arabidopsis thaliana

52% id,
100% cov

METE_KALTU / C1KEU0: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Cobalamin-independent methionine synthase; Pollen allergen Sal k 3; SkMetE; Vitamin-B12-independent methionine synthase; Allergen Sal k 3.0101; EC from Kali turgidum

52% id,
100% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory