Curated BLAST for Genomes

 

Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 28 curated entries in PaperBLAST's database that match '2.3.1.8' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS21700: phosphotransacetylase
is similar to:
PaperBLAST

pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum

50% id,
100% cov

O52593: phosphate acetyltransferase (EC 2.3.1.8) from Acetivibrio thermocellus

50% id,
99% cov

pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens

50% id,
96% cov

More...

BPHYT_RS27695: bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
is similar to:
PaperBLAST

CH_090885: phosphate acetyltransferase; EC 2.3.1.8 from Thermotoga maritima

39% id,
99% cov

EUTD_SALTY / P41790: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; Phosphotransacetylase EutD; PATC EutD; EC 2.3.1.8 from Salmonella typhimurium
P41790: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica

28% id,
96% cov

pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens

26% id,
93% cov

More...

BPHYT_RS18310: malic enzyme
is similar to:
PaperBLAST

B2RK03: phosphate acetyltransferase (EC 2.3.1.8) from Porphyromonas gingivalis

33% id,
99% cov

EUTD_SALTY / P41790: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; Phosphotransacetylase EutD; PATC EutD; EC 2.3.1.8 from Salmonella typhimurium
P41790: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica

32% id,
98% cov

PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum

33% id,
95% cov

More...

BPHYT_RS16880: malic enzyme
is similar to:
PaperBLAST

PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum

34% id,
95% cov

pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens

31% id,
97% cov

Q5LMK3: phosphate acetyltransferase (EC 2.3.1.8) from Ruegeria pomeroyi

30% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory