Curated BLAST for Genomes

 

Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 1 curated entries in PaperBLAST's database that match '2.3.1.89' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS12190: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
is similar to:
PaperBLAST

DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis

34% id,
60% cov

BPHYT_RS12655: anhydrase
is similar to:
PaperBLAST

DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis

28% id,
63% cov

BPHYT_RS31070: acetyltransferase
is similar to:
PaperBLAST

DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis

31% id,
56% cov

BPHYT_RS18565: bifunctional protein GlmU
is similar to:
PaperBLAST

DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis

31% id,
53% cov

BPHYT_RS21290: serine acetyltransferase
is similar to:
PaperBLAST

DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis

31% id,
52% cov

BPHYT_RS04025: hypothetical protein
is similar to:
PaperBLAST

DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis

30% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory