Curated BLAST for Genomes

 

Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 150 curated entries in PaperBLAST's database that match '2.4.2.1'.

These curated entries have 101 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS17400: anthranilate phosphoribosyltransferase
is similar to:
PaperBLAST

TRPD_XANCP / Q8PD71: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Xanthomonas campestris

75% id,
99% cov

TRPD_THET8 / Q5SH88: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus
TRPD_THETH / P83827: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus

42% id,
100% cov

TRPD_SACS2 / P50384: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Saccharolobus solfataricus
P50384: anthranilate phosphoribosyltransferase (EC 2.4.2.18) from Saccharolobus solfataricus

39% id,
94% cov

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BPHYT_RS33840: amidophosphoribosyltransferase
is similar to:
PaperBLAST

PUR1_ECOLI / P0AG16: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Escherichia coli
Ade / b2312: amidophosphoribosyltransferase (EC 2.4.2.14) from Escherichia coli
purF / P0AG16: amidophosphoribosyltransferase (EC 2.4.2.14) from Escherichia coli

58% id,
96% cov

PUR1_YEAST / P04046: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; EC 2.4.2.14 from Saccharomyces cerevisiae
ADE4 / P04046: phosphoribosylpyrophosphate amidotransferase (EC 2.4.2.14) from Saccharomyces cerevisiae

50% id,
98% cov

ade4 / RF|NP_594961.1: amidophosphoribosyltransferase Ade4; EC 2.4.2.14 from Schizosaccharomyces pombe

49% id,
98% cov

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BPHYT_RS15645: nicotinate-nucleotide pyrophosphorylase
is similar to:
PaperBLAST

NADC_SALTY / P30012: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Salmonella typhimurium

53% id,
91% cov

NadC / b0109: quinolinate phosphoribosyltransferase (decarboxylating) (EC 2.4.2.19) from Escherichia coli
nadC: nicotinate-nucleotide diphosphorylase, carboxylating; EC 2.4.2.19 from Escherichia coli
nadC / P30011: quinolinate phosphoribosyltransferase (decarboxylating) (EC 2.4.2.19) from Escherichia coli

49% id,
91% cov

NADC_MYCTU / P9WJJ7: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Mycobacterium tuberculosis
P9WJJ7: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Mycobacterium tuberculosis

41% id,
96% cov

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BPHYT_RS18320: orotate phosphoribosyltransferase
is similar to:
PaperBLAST

PYRE_RHILT / P42719: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Rhizobium leguminosarum

59% id,
82% cov

PYRE_BACCL / P46534: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Bacillus caldolyticus

33% id,
99% cov

Q8DTV2: orotate phosphoribosyltransferase (EC 2.4.2.10) from Streptococcus mutans

32% id,
100% cov

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BPHYT_RS09140: laccase
is similar to:
PaperBLAST

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli

47% id,
100% cov

PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus

33% id,
89% cov

PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.1; EC 2.4.2.28 from Unknown prokaryotic

30% id,
94% cov

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BPHYT_RS26895: nicotinate phosphoribosyltransferase
is similar to:
PaperBLAST

NAMPT_HUMAN / P43490: Nicotinamide phosphoribosyltransferase; NAmPRTase; Nampt; Pre-B-cell colony-enhancing factor 1; Pre-B cell-enhancing factor; Visfatin; EC 2.4.2.12 from Homo sapiens
P43490: nicotinamide phosphoribosyltransferase (EC 2.4.2.12) from Homo sapiens

44% id,
97% cov

NAMPT_MOUSE / Q99KQ4: Nicotinamide phosphoribosyltransferase; NAmPRTase; Nampt; Pre-B-cell colony-enhancing factor 1 homolog; PBEF; Visfatin; EC 2.4.2.12 from Mus musculus
Q99KQ4: nicotinamide phosphoribosyltransferase (EC 2.4.2.12) from Mus musculus

44% id,
97% cov

NAMPT_RAT / Q80Z29: Nicotinamide phosphoribosyltransferase; NAmPRTase; Nampt; Pre-B-cell colony-enhancing factor 1 homolog; PBEF; Visfatin; EC 2.4.2.12 from Rattus norvegicus
Q80Z29: nicotinamide phosphoribosyltransferase (EC 2.4.2.12) from Rattus norvegicus

44% id,
97% cov

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BPHYT_RS17715: ATP phosphoribosyltransferase
is similar to:
PaperBLAST

HIS1_SALTY / P00499: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Salmonella typhimurium

35% id,
68% cov

Q9PM78: ATP phosphoribosyltransferase (EC 2.4.2.17) from Campylobacter jejuni

33% id,
68% cov

HIS1_ECOLI / P60757: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Escherichia coli
HisG / b2019: ATP phosphoribosyltransferase (EC 2.4.2.17) from Escherichia coli
hisG / P60757: ATP phosphoribosyltransferase (EC 2.4.2.17) from Escherichia coli

33% id,
68% cov

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BPHYT_RS02940: adenine phosphoribosyltransferase
is similar to:
PaperBLAST

PYRE_BACCL / P46534: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Bacillus caldolyticus

29% id,
65% cov

pyrE / P25972: orotate phosphoribosyltransferase (EC 2.4.2.10) from Bacillus subtilis

26% id,
55% cov

UMPS_CAEEL / G5EDZ2: Uridine 5'-monophosphate synthase; UMP synthase; EC 2.4.2.10; EC 4.1.1.23 from Caenorhabditis elegans

28% id,
19% cov

BPHYT_RS17395: anthranilate synthase subunit II
is similar to:
PaperBLAST

TRPGD_ECOLI / P00904: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Escherichia coli
TrpD / b1263: anthranilate synthase subunit TrpD (EC 2.4.2.18; EC 4.1.3.27) from Escherichia coli
trpD / P00904: anthranilate synthase subunit TrpD (EC 2.4.2.18) from Escherichia coli

44% id,
37% cov

TRPGD_SALTY / P00905: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Salmonella typhimurium

43% id,
37% cov

BPHYT_RS23405: glucosamine--fructose-6-phosphate aminotransferase
is similar to:
PaperBLAST

ASE2_ARATH / Q9STG9: Amidophosphoribosyltransferase 2, chloroplastic; AtATase2; AtPURF2; PRPP2; Glutamine phosphoribosylpyrophosphate amidotransferase 2; AtGPRAT2; Protein CHLOROPLAST IMPORT APPARATUS 1; Protein DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS; EC 2.4.2.14 from Arabidopsis thaliana
Q9STG9: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

23% id,
70% cov

ASE3_ARATH / Q9T0J5: Amidophosphoribosyltransferase 3, chloroplastic; AtATase3; PRPP3; Glutamine phosphoribosylpyrophosphate amidotransferase 3; AtGPRAT3; EC 2.4.2.14 from Arabidopsis thaliana
Q9T0J5: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

24% id,
65% cov

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

29% id,
47% cov

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BPHYT_RS07410: glucosamine--fructose-6-phosphate aminotransferase
is similar to:
PaperBLAST

ASE3_ARATH / Q9T0J5: Amidophosphoribosyltransferase 3, chloroplastic; AtATase3; PRPP3; Glutamine phosphoribosylpyrophosphate amidotransferase 3; AtGPRAT3; EC 2.4.2.14 from Arabidopsis thaliana
Q9T0J5: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

25% id,
59% cov

ASE1_ARATH / Q9SI61: Amidophosphoribosyltransferase 1, chloroplastic; AtATase1; PRPP1; Glutamine phosphoribosylpyrophosphate amidotransferase 1; AtGPRAT1; EC 2.4.2.14 from Arabidopsis thaliana
Q9SI61: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

26% id,
53% cov

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

23% id,
47% cov

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BPHYT_RS18560: glucosamine--fructose-6-phosphate aminotransferase
is similar to:
PaperBLAST

ASE3_ARATH / Q9T0J5: Amidophosphoribosyltransferase 3, chloroplastic; AtATase3; PRPP3; Glutamine phosphoribosylpyrophosphate amidotransferase 3; AtGPRAT3; EC 2.4.2.14 from Arabidopsis thaliana
Q9T0J5: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

24% id,
60% cov

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

23% id,
57% cov

ASE2_ARATH / Q9STG9: Amidophosphoribosyltransferase 2, chloroplastic; AtATase2; AtPURF2; PRPP2; Glutamine phosphoribosylpyrophosphate amidotransferase 2; AtGPRAT2; Protein CHLOROPLAST IMPORT APPARATUS 1; Protein DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS; EC 2.4.2.14 from Arabidopsis thaliana
Q9STG9: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

28% id,
40% cov

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The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory