Curated BLAST for Genomes

 

Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 46 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 39 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS02045: sugar kinase
is similar to:
PaperBLAST

BPHYT_RS02045: Fructokinase (EC 2.7.1.4) from Burkholderia phytofirmans

100% id,
100% cov

AO356_00035: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

50% id,
97% cov

Pf6N2E2_1965: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

49% id,
97% cov

More...

BPHYT_RS09175: 2-dehydro-3-deoxygluconokinase
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

31% id,
99% cov

Q42645: fructokinase (EC 2.7.1.4) from Beta vulgaris

32% id,
95% cov

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

30% id,
96% cov

BPHYT_RS11300: 2-dehydro-3-deoxygluconokinase
is similar to:
PaperBLAST

SCRK1_MAIZE / Q6XZ79: Fructokinase-1; ZmFRK1; EC 2.7.1.4 from Zea mays

31% id,
98% cov

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

31% id,
98% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

31% id,
98% cov

More...

BPHYT_RS13910: 5-dehydro-2-deoxygluconokinase
is similar to:
PaperBLAST

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

29% id,
97% cov

Echvi_2804: Fructokinase (EC 2.7.1.4) from Echinicola vietnamensis

26% id,
94% cov

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

33% id,
37% cov

BPHYT_RS25805: ribokinase
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

27% id,
100% cov

Q42896: fructokinase (EC 2.7.1.4) from Solanum lycopersicum

26% id,
98% cov

P37829: fructokinase (EC 2.7.1.4) from Solanum tuberosum

26% id,
98% cov

More...

BPHYT_RS20695: ribokinase
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

26% id,
99% cov

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

29% id,
88% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

29% id,
88% cov

More...

BPHYT_RS14860: sugar kinase
is similar to:
PaperBLAST

Pf6N2E2_1965: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

25% id,
76% cov

AO356_00035: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

25% id,
77% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

656791-658044 (frame -2) on NC_010676
is similar to:
PaperBLAST

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis

26% id,
45% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory