Curated BLAST for Genomes

 

Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 1 curated entries in PaperBLAST's database that match '3.1.1.110' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS16915: gluconolaconase
is similar to:
PaperBLAST

xylC / A0A0H3C6P8: xylono-1,5-lactonase (EC 3.1.1.110) from Caulobacter vibrioides

36% id,
95% cov

BPHYT_RS24170: gluconolactonase
is similar to:
PaperBLAST

xylC / A0A0H3C6P8: xylono-1,5-lactonase (EC 3.1.1.110) from Caulobacter vibrioides

32% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory