Curated BLAST for Genomes

 

Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 11 curated entries in PaperBLAST's database that match '3.1.1.17' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS24170: gluconolactonase
is similar to:
PaperBLAST

A9CPS8: gluconolactonase (EC 3.1.1.17) from Euglena gracilis

33% id,
97% cov

RGN_MOUSE / Q64374: Regucalcin; RC; Gluconolactonase; GNL; Senescence marker protein 30; SMP-30; EC 3.1.1.17 from Mus musculus
Q64374: gluconolactonase (EC 3.1.1.17) from Mus musculus

32% id,
99% cov

RGN_XENLA / Q9I922: Regucalcin; RC; Gluconolactonase; GNL; Senescence marker protein 30; SMP-30; xSMP-30; EC 3.1.1.17 from Xenopus laevis

32% id,
99% cov

More...

BPHYT_RS21245: gluconolactonase
is similar to:
PaperBLAST

GNL_ZYMMO / Q01578: Gluconolactonase; D-glucono-delta-lactone lactonohydrolase; EC 3.1.1.17 from Zymomonas mobilis
gnl / Q01578: gluconolactonase subunit (EC 3.1.1.17) from Zymomonas mobilis
Q01578: gluconolactonase (EC 3.1.1.17) from Zymomonas mobilis

31% id,
87% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory