Curated BLAST for Genomes

 

Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 46 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS08815: L-asparaginase
is similar to:
PaperBLAST

BPHYT_RS08815: L-asparaginase (EC 3.5.1.1) from Burkholderia phytofirmans

100% id,
100% cov

Q66CJ2: asparaginase (EC 3.5.1.1) from Yersinia pseudotuberculosis

51% id,
94% cov

ASPG2_ECOLI / P00805: L-asparaginase 2; L-asparaginase II; L-ASNase II; L-asparagine amidohydrolase II; Colaspase; EC 3.5.1.1 from Escherichia coli
AnsB / b2957: L-asparaginase 2 (EC 3.5.1.38; EC 3.5.1.1) from Escherichia coli
P00805: asparaginase (EC 3.5.1.1) from Escherichia coli

48% id,
95% cov

More...

BPHYT_RS07040: asparaginase
is similar to:
PaperBLAST

Q9RFN5: asparaginase (EC 3.5.1.1) from Rhizobium etli

62% id,
95% cov

PGA1_c36210: L-asparaginase (EC 3.5.1.1) from Phaeobacter inhibens

34% id,
99% cov

W0KM71: asparaginase (EC 3.5.1.1) from Nocardiopsis alba

33% id,
88% cov

BPHYT_RS15545: isoaspartyl peptidase
is similar to:
PaperBLAST

P37595: beta-aspartyl-peptidase (EC 3.4.19.5); asparaginase (EC 3.5.1.1) from Escherichia coli

57% id,
97% cov

Q8GXG1: asparaginase (EC 3.5.1.1) from Arabidopsis thaliana

42% id,
95% cov

CCNA_00096: asparaginase (EC 3.5.1.1) from Caulobacter crescentus

38% id,
99% cov

More...

BPHYT_RS21005: asparaginase
is similar to:
PaperBLAST

BPHYT_RS08815: L-asparaginase (EC 3.5.1.1) from Burkholderia phytofirmans

45% id,
95% cov

B6ZCD8: asparaginase (EC 3.5.1.1) from Helicobacter pylori
I0ZIE0: asparaginase (EC 3.5.1.1) from Helicobacter pylori

43% id,
98% cov

Q6Q4F3: asparaginase (EC 3.5.1.1) from Dickeya chrysanthemi

46% id,
93% cov

More...

BPHYT_RS09645: ankyrin
is similar to:
PaperBLAST

H0W0T5: asparaginase (EC 3.5.1.1) from Cavia porcellus

27% id,
38% cov

W0G253: asparaginase (EC 3.5.1.1) from Rhizomucor miehei

24% id,
30% cov

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus

39% id,
16% cov

More...

BPHYT_RS26210: ankyrin
is similar to:
PaperBLAST

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus

31% id,
26% cov

ASPG_DIRIM / Q9U518: L-asparaginase; DiAsp; L-asparagine amidohydrolase; EC 3.5.1.1 from Dirofilaria immitis

24% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory