Curated BLAST for Genomes


Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 37 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS02730: N-acetylglucosamine-6-phosphate deacetylase
is similar to:

BPHYT_RS02730: N-acetylglucosamine-6-phosphate deacetylase (EC from Burkholderia phytofirmans

100% id,
100% cov

PS417_22985: N-acetylglucosamine-6-phosphate deacetylase (EC from Pseudomonas simiae

69% id,
99% cov

AO356_17550: N-acetylglucosamine-6-phosphate deacetylase (EC from Pseudomonas fluorescens

68% id,
99% cov


BPHYT_RS03125: D-aminoacylase
is similar to:

Q8Y8E8: N-acetylglucosamine-6-phosphate deacetylase (EC from Listeria monocytogenes

35% id,
24% cov

BPHYT_RS13300: phenylhydantoinase
is similar to:

NAGA_BACSU / O34450: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC from Bacillus subtilis
CAB15506.1: N-acetylglucosamine 6-phosphate deacetylase (NagA;BSU35010) (EC

38% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory