Curated BLAST for Genomes

 

Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 18 curated entries in PaperBLAST's database that match '3.5.1.38' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS27475: glutaminase
is similar to:
PaperBLAST

GlsB / b1524: glutaminase 2 (EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli
glsB / P0A6W0: glutaminase 2 (EC 3.5.1.38) from Escherichia coli

51% id,
98% cov

GlsA / b0485: glutaminase 1 (EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli
glsA / P77454: glutaminase 1 (EC 3.5.1.38) from Escherichia coli

37% id,
93% cov

O94925: glutaminase kidney isoform small subunit (EC 3.5.1.38) from Homo sapiens

36% id,
43% cov

More...

BPHYT_RS21005: asparaginase
is similar to:
PaperBLAST

ASPQ_PSES7 / P10182: Glutaminase-asparaginase; L-ASNase/L-GLNase; L-asparagine/L-glutamine amidohydrolase; PGA; EC 3.5.1.38 from Pseudomonas sp.

49% id,
97% cov

ASPQ_PSEFA / O68897: Glutaminase-asparaginase; L-ASNase/L-GLNase; L-asparagine/L-glutamine amidohydrolase; EC 3.5.1.38 from Pseudomonas fluorescens

48% id,
91% cov

ansB / PDB|1AGX_A: glutaminase-asparaginase; EC 3.5.1.38 from Acinetobacter glutaminasificans

42% id,
100% cov

More...

BPHYT_RS08815: L-asparaginase
is similar to:
PaperBLAST

AnsB / b2957: L-asparaginase 2 (EC 3.5.1.38; EC 3.5.1.1) from Escherichia coli
ansB / P00805: L-asparaginase 2 (EC 3.5.1.38) from Escherichia coli

48% id,
95% cov

ansB1 / Q6Q4F4: L-asparaginase subunit (EC 3.5.1.38) from Pectobacterium atrosepticum

48% id,
94% cov

ASPQ_PSES7 / P10182: Glutaminase-asparaginase; L-ASNase/L-GLNase; L-asparagine/L-glutamine amidohydrolase; PGA; EC 3.5.1.38 from Pseudomonas sp.

43% id,
98% cov

More...

BPHYT_RS09645: ankyrin
is similar to:
PaperBLAST

ASPG / Q86U10: 60 kDa lysophospholipase (EC 3.1.1.47; EC 3.5.1.38) from Homo sapiens

26% id,
34% cov

BPHYT_RS26210: ankyrin
is similar to:
PaperBLAST

ASPG / Q86U10: 60 kDa lysophospholipase (EC 3.1.1.47; EC 3.5.1.38) from Homo sapiens

33% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory