Curated BLAST for Genomes

 

Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 12 curated entries in PaperBLAST's database that match '3.5.3.13' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS07580: N-formimino-L-glutamate deiminase
is similar to:
PaperBLAST

AO356_09645: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

52% id,
100% cov

Pf6N2E2_3808: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

52% id,
100% cov

Ac3H11_2549: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Acidovorax sp.

53% id,
97% cov

More...

BPHYT_RS35325: amidohydrolase
is similar to:
PaperBLAST

PGA1_c36360: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Phaeobacter inhibens

27% id,
100% cov

SMc00673: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Sinorhizobium meliloti

26% id,
81% cov

Ac3H11_2549: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Acidovorax sp.

26% id,
81% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory