Searching in Burkholderia phytofirmans PsJN (BFirm)
Found 22 curated entries in PaperBLAST's database that match '4.1.1.18' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Burkholderia phytofirmans PsJN, or try another query
| BPHYT_RS35090: diaminopimelate decarboxylase is similar to: | PaperBLAST |
A0A0H3H393: lysine decarboxylase (EC 4.1.1.18) from Klebsiella oxytoca | 64% id, 97% cov |
| BPHYT_RS04980: lysine decarboxylase is similar to: | PaperBLAST |
LDCA_PSEAE / Q9I2S7: Lysine decarboxylase LdcA; EC 4.1.1.18 from Pseudomonas aeruginosa | 49% id, 99% cov |
Q9Z4R7: lysine decarboxylase (EC 4.1.1.18) from Eikenella corrodens | 37% id, 98% cov |
A0A094XEM2: lysine decarboxylase (EC 4.1.1.18) from Klebsiella aerogenes | 39% id, 93% cov |
| BPHYT_RS06500: LOG family protein is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 47% id, 83% cov |
| BPHYT_RS17930: diaminopimelate decarboxylase is similar to: | PaperBLAST |
A0A0H3H393: lysine decarboxylase (EC 4.1.1.18) from Klebsiella oxytoca | 34% id, 98% cov |
| BPHYT_RS34205: pyridoxal-dependent decarboxylase is similar to: | PaperBLAST |
desA / Q9L072: L-lysine decarboxylase (EC 4.1.1.18) from Streptomyces coelicolor | 28% id, 86% cov |
| BPHYT_RS33615: decarboxylase is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 28% id, 77% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 152716-154110 (frame -1) on NC_010681 is similar to: | PaperBLAST |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 27% id, 89% cov |
Lawrence Berkeley National Laboratory