Curated BLAST for Genomes

 

Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 106 curated entries in PaperBLAST's database that match '4.1.2.13' as complete word(s).

These curated entries have 82 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS16260: fructose-bisphosphate aldolase
is similar to:
PaperBLAST

ALF_XANFL / Q56815: Fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Xanthobacter flavus

72% id,
100% cov

ALF_NOSS1 / Q8YNK2: Fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Nostoc sp.

67% id,
99% cov

Q602L6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Methylococcus capsulatus

66% id,
100% cov

More...

BPHYT_RS10545: fructose-1,6-bisphosphate aldolase
is similar to:
PaperBLAST

fbaB / P74309: class I fructose-bisphosphate aldolase/sedoheptulose-1,7-bisphosphate aldolase monomer (EC 4.1.2.13) from Synechocystis sp.

55% id,
98% cov

Q8I8I2: fructose-bisphosphate aldolase (EC 4.1.2.13) from Toxoplasma gondii

30% id,
81% cov

B9PW35: fructose-bisphosphate aldolase (EC 4.1.2.13) from Toxoplasma gondii
A0A125YGE6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Toxoplasma gondii

30% id,
68% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory