Curated BLAST
Searching in Burkholderia phytofirmans PsJN (BFirm)
Found 17 curated entries in PaperBLAST's database that match '4.1.2.14' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Burkholderia phytofirmans PsJN, or try another query
BPHYT_RS16730: 2-dehydro-3-deoxyphosphogluconate aldolase
is similar to: | PaperBLAST |
Q0K1X1: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Cupriavidus necator | 51% id,
98% cov |
ALKH_ECOLI / P0A955: KHG/KDPG aldolase; EC 4.1.3.16; EC 4.1.2.14 from Escherichia coli
Kga / b1850: KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.2.14; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli
eda / RF|NP_416364: KHG/KDPG aldolase; EC 4.1.2.14; EC 4.1.3.16 from Escherichia coli
P0A955: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14); 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16); (4S)-4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.42) from Escherichia coli | 44% id,
97% cov |
Q00384: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Zymomonas mobilis | 42% id,
99% cov |
ALKD_PSEA6 / Q15X88: 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phospho-D-gluconate aldolase; KDPG aldolase; EC 4.1.2.14 from Pseudoalteromonas atlantica | 43% id,
95% cov |
CA265_RS19860: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Pedobacter sp. | 31% id,
94% cov |
D4GV57: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Haloferax volcanii | 30% id,
96% cov |
ALKH_BACSU / P50846: KHG/KDPG aldolase; EC 4.1.3.16; EC 4.1.2.14 from Bacillus subtilis | 34% id,
82% cov |
A4VVI7: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Streptococcus suis | 32% id,
86% cov |
More... |
BPHYT_RS16945: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase
is similar to: | PaperBLAST |
D4GV57: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Haloferax volcanii | 34% id,
91% cov |
Q0K1X1: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Cupriavidus necator | 30% id,
87% cov |
Q00384: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Zymomonas mobilis | 32% id,
79% cov |
ALKH_ECOLI / P0A955: KHG/KDPG aldolase; EC 4.1.3.16; EC 4.1.2.14 from Escherichia coli
Kga / b1850: KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.2.14; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli
eda / RF|NP_416364: KHG/KDPG aldolase; EC 4.1.2.14; EC 4.1.3.16 from Escherichia coli
P0A955: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14); 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16); (4S)-4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.42) from Escherichia coli | 33% id,
75% cov |
ALKD_PSEA6 / Q15X88: 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phospho-D-gluconate aldolase; KDPG aldolase; EC 4.1.2.14 from Pseudoalteromonas atlantica | 31% id,
76% cov |
CA265_RS19860: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Pedobacter sp. | 32% id,
72% cov |
A0A0B6VQ18: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Flavobacterium sp. | 27% id,
73% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory