Curated BLAST
Searching in Burkholderia phytofirmans PsJN (BFirm)
Found 26 curated entries in PaperBLAST's database that match '4.1.2.4' as complete word(s).
These curated entries have 19 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Burkholderia phytofirmans PsJN, or try another query
BPHYT_RS25815: deoxyribose-phosphate aldolase
is similar to: | PaperBLAST |
DEOC_HUMAN / Q9Y315: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Homo sapiens
Q9Y315: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Homo sapiens | 59% id,
99% cov |
DEOC_SALTY / Q8ZJV8: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Salmonella typhimurium | 39% id,
93% cov |
DEOC_ECOLI / P0A6L0: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Escherichia coli
Tlr / b4381: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Escherichia coli
deoC / P0A6L0: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Escherichia coli
P0A6L0: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Escherichia coli | 39% id,
93% cov |
Q7WT44: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Klebsiella pneumoniae | 38% id,
95% cov |
A0A125YLW2: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Toxoplasma gondii | 36% id,
92% cov |
DEOC_THET8 / Q5SJ28: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Thermus thermophilus | 34% id,
80% cov |
D5AHU8: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Streptococcus suis | 28% id,
95% cov |
DEOC_RHOE4 / C0ZUQ6: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Rhodococcus erythropolis
C0ZUQ6: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Rhodococcus erythropolis | 28% id,
86% cov |
DEOC_STRP6 / Q5XA31: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Streptococcus pyogenes | 31% id,
77% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory