Curated BLAST for Genomes

 

Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.44' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS13920: xylose isomerase
is similar to:
PaperBLAST

BPHYT_RS13920: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Burkholderia phytofirmans

100% id,
100% cov

HSERO_RS12135: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Herbaspirillum seropedicae

73% id,
99% cov

AO353_21340: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens

66% id,
97% cov

More...

BPHYT_RS04700: AP endonuclease
is similar to:
PaperBLAST

BPHYT_RS13920: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Burkholderia phytofirmans

28% id,
52% cov

AO353_21340: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens

24% id,
58% cov

AO356_23165: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens

23% id,
58% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory