Curated BLAST for Genomes


Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 18 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS07565: urocanate hydratase
is similar to:

SM_b21163: Urocanate hydratase (EC from Sinorhizobium meliloti

72% id,
100% cov

Pf1N1B4_1587: Urocanate hydratase (EC from Pseudomonas fluorescens

73% id,
99% cov

PS417_01720: Urocanate hydratase (EC from Pseudomonas simiae

72% id,
99% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory