Searching in Burkholderia phytofirmans PsJN (BFirm)
Found 9 curated entries in PaperBLAST's database that match '4.2.1.6' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 17 relevant proteins in Burkholderia phytofirmans PsJN, or try another query
| BPHYT_RS16405: galactonate dehydratase is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 100% id, 100% cov |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 64% id, 100% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 51% id, 100% cov |
| BPHYT_RS19730: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 66% id, 100% cov |
| BPHYT_RS21270: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 51% id, 99% cov |
| BPHYT_RS31695: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 45% id, 99% cov |
| BPHYT_RS04815: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 37% id, 95% cov |
| BPHYT_RS23430: bifunctional D-altronate/D-mannonate dehydratase is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 32% id, 100% cov |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 32% id, 100% cov |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 31% id, 96% cov |
| BPHYT_RS09885: isomerase is similar to: | PaperBLAST |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 36% id, 90% cov |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 34% id, 94% cov |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 31% id, 97% cov |
| BPHYT_RS25650: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 33% id, 96% cov |
| BPHYT_RS10980: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase is similar to: | PaperBLAST |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 31% id, 96% cov |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 29% id, 99% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 30% id, 91% cov |
| BPHYT_RS31965: mandelate racemase is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 30% id, 94% cov |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 31% id, 93% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 29% id, 92% cov |
| BPHYT_RS28240: L-rhamnonate dehydratase is similar to: | PaperBLAST |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 28% id, 91% cov |
GAD_PICTO / Q6L1T2: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Picrophilus torridus | 27% id, 85% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 32% id, 70% cov |
| BPHYT_RS31620: mandelate racemase is similar to: | PaperBLAST |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 28% id, 86% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 30% id, 78% cov |
| BPHYT_RS07840: muconate cycloisomerase is similar to: | PaperBLAST |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 27% id, 89% cov |
| BPHYT_RS10675: muconate cycloisomerase is similar to: | PaperBLAST |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 25% id, 91% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 24% id, 73% cov |
| BPHYT_RS31145: glucarate dehydratase is similar to: | PaperBLAST |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 22% id, 91% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 26% id, 73% cov |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 25% id, 74% cov |
| BPHYT_RS10100: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 34% id, 54% cov |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 36% id, 43% cov |
| BPHYT_RS20755: fuconate dehydratase is similar to: | PaperBLAST |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 20% id, 80% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 16 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory