Searching in Burkholderia phytofirmans PsJN (BFirm)
Found 7 curated entries in PaperBLAST's database that match '4.3.1.12'.
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Burkholderia phytofirmans PsJN, or try another query
| BPHYT_RS21000: ornithine cyclodeaminase is similar to: | PaperBLAST |
OCD_PSEPK / Q88H32: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Pseudomonas putida | 27% id, 63% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2336079-2337248 (frame +3) on NC_010681 is similar to: | PaperBLAST |
OCD_AGRT4 / Q59701: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium tumefaciens | 23% id, 90% cov |
OCD_AGRFC / P09773: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium fabrum | 24% id, 73% cov |
OCD_PSEPK / Q88H32: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Pseudomonas putida | 21% id, 66% cov |
Lawrence Berkeley National Laboratory