Curated BLAST for Genomes


Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 23 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS32825: xylose isomerase
is similar to:

BPHYT_RS32825: Xylose isomerase (EC from Burkholderia phytofirmans

100% id,
100% cov

AO356_28500: Xylose isomerase (EC from Pseudomonas fluorescens

72% id,
100% cov

PS417_10945: Xylose isomerase (EC from Pseudomonas simiae

71% id,
100% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory