Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 26 curated entries in PaperBLAST's database that match '1.1.1.14' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3771: 3-oxoacyl-[acyl-carrier protein] reductase (NCBI ptt file)
is similar to:
PaperBLAST

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

36% id,
100% cov

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

37% id,
94% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides
polS / GI|2338763: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Rhodobacter sphaeroides

34% id,
98% cov

More...

BT1911: 7-alpha-hydroxysteroid dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

36% id,
97% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides
polS / GI|2338763: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Rhodobacter sphaeroides

34% id,
98% cov

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

33% id,
98% cov

More...

BT3232: gluconate 5-dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides
polS / GI|2338763: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Rhodobacter sphaeroides

35% id,
98% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

34% id,
97% cov

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

33% id,
95% cov

More...

BT0409: putative short-chain dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

32% id,
95% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

29% id,
97% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

27% id,
97% cov

More...

BT0130: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

31% id,
96% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

30% id,
97% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

29% id,
97% cov

BT3617: sorbitol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / GI|304153: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

30% id,
97% cov

HSERO_RS17015: sorbitol dehydrogenase (EC 1.1.1.14); xylitol dehydrogenase (EC 1.1.1.9) from Herbaspirillum seropedicae

29% id,
99% cov

Q3C2L6: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Solanum lycopersicum

28% id,
97% cov

More...

BT1015: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

30% id,
92% cov

BT4512: putative zinc-type alcohol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

Q3C2L6: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Solanum lycopersicum

30% id,
90% cov

xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina

26% id,
96% cov

NAD-SDH / Q9ZR22: D-sorbitol dehydrogenase (EC 1.1.1.14) from Malus domestica

29% id,
85% cov

More...

BT4424: sorbitol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / GI|304153: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

26% id,
97% cov

NAD-SDH / Q9ZR22: D-sorbitol dehydrogenase (EC 1.1.1.14) from Malus domestica

25% id,
87% cov

Q5I6M4: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Malus domestica

25% id,
87% cov

More...

BT0972: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides
polS / GI|2338763: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Rhodobacter sphaeroides

27% id,
81% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

31% id,
68% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

25% id,
83% cov

More...

BT2188: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

27% id,
72% cov

BT1651: pyrophosphorylase (NCBI ptt file)
is similar to:
PaperBLAST

Ac3H11_2940: D-sorbitol 2-dehydrogenase (EC 1.1.1.14) from Acidovorax sp.

20% id,
84% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory