Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 148 curated entries in PaperBLAST's database that match '1.1.1.28'.

These curated entries have 116 distinct sequences.

Running ublast with E ≤ 0.01

Found 24 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT1575: putative dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

Q8RG11: D-lactate dehydrogenase (EC 1.1.1.28) from Fusobacterium nucleatum

57% id,
98% cov

Q8EI78: D-lactate dehydrogenase (EC 1.1.1.28) from Shewanella oneidensis

52% id,
99% cov

Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa

52% id,
99% cov

More...

BT1383: oxidoreductase, aldo/keto reductase (NCBI ptt file)
is similar to:
PaperBLAST

GR_BACSU / O32210: Glyoxal reductase; GR; Methylglyoxal reductase; EC 1.1.1.-; EC 1.1.1.283 from Bacillus subtilis
yvgN / O32210: glyoxal/methylglyoxal reductase (EC 1.1.1.283; EC 1.1.1.91) from Bacillus subtilis

49% id,
95% cov

DMS1D_WHEAT / A0A1X9QHJ0: Deoxymugineic acid synthase 1-D; EC 1.1.1.285 from Triticum aestivum

34% id,
92% cov

DMS1A_WHEAT / W5DYE3: Deoxymugineic acid synthase 1-A; TaDMAS1; EC 1.1.1.285 from Triticum aestivum

34% id,
92% cov

More...

BT2071: isocitrate dehydrogenase [NADP] (NCBI ptt file)
is similar to:
PaperBLAST

Q4J6C9: isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286) from Sulfolobus acidocaldarius

45% id,
97% cov

IDH-V / Q945K7: NAD+-dependent isocitrate dehydrogenase catalytic subunit (EC 1.1.1.286) from Arabidopsis thaliana

33% id,
87% cov

IDH3A / P50213: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.286) from Homo sapiens

31% id,
91% cov

More...

BT3771: 3-oxoacyl-[acyl-carrier protein] reductase (NCBI ptt file)
is similar to:
PaperBLAST

Q58LW6: D-arabinitol dehydrogenase (NADP+) (EC 1.1.1.287) from Gluconobacter oxydans

36% id,
97% cov

SOU1_CANAL / P87219: Sorbose reductase SOU1; Sorbitol utilization protein SOU1; EC 1.1.1.289 from Candida albicans
SOU1 / GI|2183243: Sorbose reductase SOU1; EC 1.1.1.289 from Candida albicans
P87219: sorbose reductase (EC 1.1.1.289) from Candida albicans

39% id,
87% cov

A4PB64: sorbose reductase (EC 1.1.1.289) from Gluconobacter frateurii

34% id,
98% cov

More...

BT1857: 3-isopropylmalate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

HICDH_THET2 / Q72IW9: Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus
HICDH_THET8 / Q5SIJ1: Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus

34% id,
100% cov

HICDH_PYRHO / O59394: Isocitrate/homoisocitrate dehydrogenase; HICDH; Beta-decarboxylating dehydrogenase; EC 1.1.1.286 from Pyrococcus horikoshii

36% id,
93% cov

Q5JFV8: isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286) from Thermococcus kodakarensis

35% id,
92% cov

More...

BT3232: gluconate 5-dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

SOU1_CANAL / P87219: Sorbose reductase SOU1; Sorbitol utilization protein SOU1; EC 1.1.1.289 from Candida albicans
SOU1 / GI|2183243: Sorbose reductase SOU1; EC 1.1.1.289 from Candida albicans
P87219: sorbose reductase (EC 1.1.1.289) from Candida albicans

36% id,
88% cov

A4PB64: sorbose reductase (EC 1.1.1.289) from Gluconobacter frateurii

32% id,
99% cov

Q308C1: D-arabinitol 4-dehydrogenase (EC 1.1.1.11); D-arabinitol dehydrogenase (NADP+) (EC 1.1.1.287) from Gluconobacter oxydans

32% id,
97% cov

More...

BT0130: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

Q58LW6: D-arabinitol dehydrogenase (NADP+) (EC 1.1.1.287) from Gluconobacter oxydans

32% id,
99% cov

Q308C1: D-arabinitol 4-dehydrogenase (EC 1.1.1.11); D-arabinitol dehydrogenase (NADP+) (EC 1.1.1.287) from Gluconobacter oxydans

31% id,
99% cov

A4PB64: sorbose reductase (EC 1.1.1.289) from Gluconobacter frateurii

30% id,
98% cov

More...

BT1911: 7-alpha-hydroxysteroid dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

ABA2_ARATH / Q9C826: Xanthoxin dehydrogenase; Protein ABSCISIC ACID DEFICIENT 2; Protein GLUCOSE INSENSITIVE 1; Protein IMPAIRED SUCROSE INDUCTION 4; Protein SALOBRENO 3; Protein SALT RESISTANT 1; Protein SUGAR INSENSITIVE 4; Short-chain alcohol dehydrogenase ABA2; Short-chain dehydrogenase reductase 1; AtSDR1; Xanthoxin oxidase; EC 1.1.1.288 from Arabidopsis thaliana
ABA2 / Q9C826: xanthoxin dehydrogenase (EC 1.1.1.288) from Arabidopsis thaliana
Q9C826: xanthoxin dehydrogenase (EC 1.1.1.288) from Arabidopsis thaliana

33% id,
94% cov

A0A0K1H1P6: xanthoxin dehydrogenase (EC 1.1.1.288) from Pisum sativum

31% id,
96% cov

Q7XZH5: xanthoxin dehydrogenase (EC 1.1.1.288) from Oryza sativa

32% id,
93% cov

More...

BT1433: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

Q58LW6: D-arabinitol dehydrogenase (NADP+) (EC 1.1.1.287) from Gluconobacter oxydans

31% id,
99% cov

Q308C1: D-arabinitol 4-dehydrogenase (EC 1.1.1.11); D-arabinitol dehydrogenase (NADP+) (EC 1.1.1.287) from Gluconobacter oxydans

30% id,
99% cov

Q9SCU0: xanthoxin dehydrogenase (EC 1.1.1.288) from Arabidopsis thaliana

32% id,
87% cov

More...

BT1207: glycerate dehydrogenase (NADH-dependent) (NCBI ptt file)
is similar to:
PaperBLAST

Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa

34% id,
87% cov

O66939: D-lactate dehydrogenase (EC 1.1.1.28) from Aquifex aeolicus

31% id,
92% cov

vanH / Q7B609: D-lactate dehydrogenase (EC 1.1.1.28) from Enterococcus faecium

32% id,
88% cov

More...

BT3361: erythronate-4-phosphate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus

29% id,
94% cov

O66939: D-lactate dehydrogenase (EC 1.1.1.28) from Aquifex aeolicus

29% id,
87% cov

E0NDE9: D-lactate dehydrogenase (EC 1.1.1.28) from Pediococcus acidilactici

25% id,
95% cov

More...

BT1015: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

A0A0K1H1P6: xanthoxin dehydrogenase (EC 1.1.1.288) from Pisum sativum

29% id,
92% cov

Q7XZH5: xanthoxin dehydrogenase (EC 1.1.1.288) from Oryza sativa

27% id,
96% cov

Q9SCU0: xanthoxin dehydrogenase (EC 1.1.1.288) from Arabidopsis thaliana

29% id,
86% cov

More...

BT4215: shikimate 5-dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

YDIB_ECOLI / P0A6D5: Quinate/shikimate dehydrogenase; NAD-dependent shikimate 5-dehydrogenase; EC 1.1.1.282 from Escherichia coli
YdiB / b1692: quinate/shikimate dehydrogenase (EC 1.1.1.282) from Escherichia coli
ydiB / RF|NP_416207: quinate/shikimate dehydrogenase; EC 1.1.1.282 from Escherichia coli
ydiB / P0A6D5: quinate/shikimate dehydrogenase (EC 1.1.1.282) from Escherichia coli

28% id,
91% cov

Q88K85: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); quinate/shikimate dehydrogenase [NAD(P)+] (EC 1.1.1.282) from Pseudomonas putida

28% id,
80% cov

A4QB65: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); quinate/shikimate dehydrogenase [NAD(P)+] (EC 1.1.1.282) from Corynebacterium glutamicum

29% id,
71% cov

More...

BT1152: D-3-phosphoglycerate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus

25% id,
99% cov

HtpH / b1380: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli
ldhA: D-lactate dehydrogenase; EC 1.1.1.28 from Escherichia coli
ldhA / P52643: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli

31% id,
76% cov

A0A140N893: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli

31% id,
76% cov

More...

BT4424: sorbitol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

ARD1_UROFA / Q4R0J7: D-arabinitol dehydrogenase 1; NADP-dependent D-arabitol dehydrogenase; EC 1.1.1.287 from Uromyces fabae
Q4R0J7: D-arabinitol dehydrogenase (NADP+) (EC 1.1.1.287) from Uromyces viciae-fabae

26% id,
97% cov

A0A1S3CB00: S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) from Cucumis melo

25% id,
69% cov

A0A0A0KBZ1: S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) from Cucumis sativus

25% id,
69% cov

More...

BT0972: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

A4PB64: sorbose reductase (EC 1.1.1.289) from Gluconobacter frateurii

30% id,
80% cov

Q9SCU0: xanthoxin dehydrogenase (EC 1.1.1.288) from Arabidopsis thaliana

26% id,
76% cov

Q7XZH5: xanthoxin dehydrogenase (EC 1.1.1.288) from Oryza sativa

26% id,
65% cov

BT0409: putative short-chain dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

A4PB64: sorbose reductase (EC 1.1.1.289) from Gluconobacter frateurii

33% id,
71% cov

Q7XZH5: xanthoxin dehydrogenase (EC 1.1.1.288) from Oryza sativa

26% id,
89% cov

BT4512: putative zinc-type alcohol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

U6C832: S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) from Paecilomyces variotii

25% id,
87% cov

A0A2K3D6Q9: S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) from Chlamydomonas reinhardtii

24% id,
89% cov

D8U4T8: S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) from Volvox carteri

23% id,
86% cov

BT1350: CDP-glucose 4,6-dehydratase (NCBI ptt file)
is similar to:
PaperBLAST

RMD_ANETH / Q6T1X6: GDP-6-deoxy-D-mannose reductase; EC 1.1.1.281 from Aneurinibacillus thermoaerophilus

28% id,
76% cov

BT1651: pyrophosphorylase (NCBI ptt file)
is similar to:
PaperBLAST

ABA2_ARATH / Q9C826: Xanthoxin dehydrogenase; Protein ABSCISIC ACID DEFICIENT 2; Protein GLUCOSE INSENSITIVE 1; Protein IMPAIRED SUCROSE INDUCTION 4; Protein SALOBRENO 3; Protein SALT RESISTANT 1; Protein SUGAR INSENSITIVE 4; Short-chain alcohol dehydrogenase ABA2; Short-chain dehydrogenase reductase 1; AtSDR1; Xanthoxin oxidase; EC 1.1.1.288 from Arabidopsis thaliana
ABA2 / Q9C826: xanthoxin dehydrogenase (EC 1.1.1.288) from Arabidopsis thaliana
Q9C826: xanthoxin dehydrogenase (EC 1.1.1.288) from Arabidopsis thaliana

26% id,
82% cov

Q9SCU0: xanthoxin dehydrogenase (EC 1.1.1.288) from Arabidopsis thaliana

26% id,
68% cov

A4PB64: sorbose reductase (EC 1.1.1.289) from Gluconobacter frateurii

24% id,
72% cov

More...

BT0466: dTDP-glucose 4,6-dehydratase (NCBI ptt file)
is similar to:
PaperBLAST

RMD_PSEAE / Q9HTB6: GDP-6-deoxy-D-mannose reductase; EC 1.1.1.281 from Pseudomonas aeruginosa
Q9HTB6: GDP-4-dehydro-6-deoxy-D-mannose reductase (EC 1.1.1.281) from Pseudomonas aeruginosa

24% id,
84% cov

BT3617: sorbitol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

D8U4T8: S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) from Volvox carteri

25% id,
77% cov

BT2066: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

A4PB64: sorbose reductase (EC 1.1.1.289) from Gluconobacter frateurii

27% id,
70% cov

BT4553: conserved hypothetical protein (NCBI ptt file)
is similar to:
PaperBLAST

GRP2_CANAL / P83775: Putative NADPH-dependent methylglyoxal reductase GRP2; Cytoplasmic antigenic protein 2; EC 1.1.1.283 from Candida albicans

29% id,
24% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 23 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4686268-4687308 (frame +1) on 241
is similar to:
PaperBLAST

D2CFJ2: S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) from Taiwanofungus camphoratus

26% id,
95% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory