Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 30 curated entries in PaperBLAST's database that match '1.1.1.307' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT1383: oxidoreductase, aldo/keto reductase (NCBI ptt file)
is similar to:
PaperBLAST

A0A0M4HL56: D-xylose reductase (EC 1.1.1.307) from Debaryomyces nepalensis

36% id,
93% cov

XYL1_CANBO / Q8X195: NADPH-dependent D-xylose reductase; XR; EC 1.1.1.307 from Candida boidinii
Q8X195: D-xylose reductase (EC 1.1.1.307) from [Candida] boidinii

34% id,
93% cov

C5J3R6: D-xylose reductase (EC 1.1.1.307) from Rasamsonia emersonii

33% id,
93% cov

More...

BT3614: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

27% id,
89% cov

BT1115: aldo/keto reductase (NCBI ptt file)
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

26% id,
86% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory