Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)
Found 2 curated entries in PaperBLAST's database that match '1.1.1.378'.
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query
| BT3771: 3-oxoacyl-[acyl-carrier protein] reductase (NCBI ptt file) is similar to: | PaperBLAST |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 39% id, 98% cov |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 39% id, 98% cov |
| BT1911: 7-alpha-hydroxysteroid dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 35% id, 98% cov |
| BT3232: gluconate 5-dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 33% id, 99% cov |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 32% id, 99% cov |
| BT1433: putative oxidoreductase (NCBI ptt file) is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 32% id, 96% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory