Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)
Found 8 curated entries in PaperBLAST's database that match '1.1.1.401' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query
| BT3771: 3-oxoacyl-[acyl-carrier protein] reductase (NCBI ptt file) is similar to: | PaperBLAST |
KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp. | 35% id, 96% cov |
C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp. | 32% id, 96% cov |
| BT3232: gluconate 5-dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp. | 33% id, 100% cov |
| BT3617: sorbitol dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
E1QSX6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Vulcanisaeta distributa | 32% id, 99% cov |
KDRDH_SULTA / P0DOW0: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; EC 1.1.1.401 from Sulfobacillus thermosulfidooxidans | 30% id, 96% cov |
D4GPB2: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Haloferax volcanii | 30% id, 96% cov |
| BT1911: 7-alpha-hydroxysteroid dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp. | 31% id, 97% cov |
C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp. | 26% id, 96% cov |
| BT4512: putative zinc-type alcohol dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
E1QSX6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Vulcanisaeta distributa | 29% id, 96% cov |
| BT1015: putative oxidoreductase (NCBI ptt file) is similar to: | PaperBLAST |
KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp. | 28% id, 94% cov |
C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp. | 26% id, 97% cov |
| BT1651: pyrophosphorylase (NCBI ptt file) is similar to: | PaperBLAST |
KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp. | 25% id, 55% cov |
| BT4424: sorbitol dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
E1QSX6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Vulcanisaeta distributa | 33% id, 33% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2400015-2400821 (frame +3) on 241 is similar to: | PaperBLAST |
KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp. | 31% id, 99% cov |
Lawrence Berkeley National Laboratory