Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 23 curated entries in PaperBLAST's database that match '1.1.1.43'.

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3771: 3-oxoacyl-[acyl-carrier protein] reductase (NCBI ptt file)
is similar to:
PaperBLAST

C785_RS13675 / A0A4P7ABK7: 2-dehydro-3-deoxy-D-pentonate/2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase (EC 1.1.1.434) from Herbaspirillum huttiense

37% id,
98% cov

XCC4067 / Q8P3K4: 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase (EC 1.1.1.434) from Xanthomonas campestris

32% id,
81% cov

BT3232: gluconate 5-dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

C785_RS13675 / A0A4P7ABK7: 2-dehydro-3-deoxy-D-pentonate/2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase (EC 1.1.1.434) from Herbaspirillum huttiense

35% id,
96% cov

BT1383: oxidoreductase, aldo/keto reductase (NCBI ptt file)
is similar to:
PaperBLAST

xyrB / A2QQ97: D-xylose reductase XyrB (EC 1.1.1.21; EC 1.1.1.431) from Aspergillus niger

35% id,
95% cov

xyl1 / Q876L8: aldose reductase (EC 1.1.1.21; EC 1.1.1.431) from Hypocrea jecorina

32% id,
96% cov

larA / A2QBD7: L-arabinose reductase LarA (EC 1.1.1.431; EC 1.1.1.21) from Aspergillus niger

33% id,
80% cov

More...

BT1911: 7-alpha-hydroxysteroid dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

C785_RS13675 / A0A4P7ABK7: 2-dehydro-3-deoxy-D-pentonate/2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase (EC 1.1.1.434) from Herbaspirillum huttiense

34% id,
96% cov

XCC4067 / Q8P3K4: 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase (EC 1.1.1.434) from Xanthomonas campestris

30% id,
81% cov

BT1804: electron transfer flavoprotein beta-subunit (NCBI ptt file)
is similar to:
PaperBLAST

LCTB_ACEWD / H6LBB0: Lactate dehydrogenase (NAD(+),ferredoxin) subunit LctB; Electron transfer flavoprotein small subunit; Electron transfer flavoprotein subunit beta; EtfB; Lactate dehydrogenase-Etf complex subunit LctB; EC 1.1.1.436 from Acetobacterium woodii

37% id,
87% cov

BT3767: lactaldehyde reductase (NCBI ptt file)
is similar to:
PaperBLAST

SARD_BILW3 / E5Y946: Sulfoacetaldehyde reductase; EC 1.1.1.433 from Bilophila wadsworthia
sarD / E5Y946: sulfoacetaldehyde reductase (NADH) (EC 1.1.1.433) from Bilophila wadsworthia

32% id,
96% cov

SQWF_CLOS9 / J1H1J3: Sulfoacetaldehyde reductase; EC 1.1.1.433 from Clostridium sp.

31% id,
90% cov

BT1433: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

C785_RS13675 / A0A4P7ABK7: 2-dehydro-3-deoxy-D-pentonate/2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase (EC 1.1.1.434) from Herbaspirillum huttiense

32% id,
96% cov

LFUCD_BURM1 / A0A0H3KNE7: L-fucose dehydrogenase; EC 1.1.1.435 from Burkholderia multivorans
BmulJ_04919 / A0A0H3KNE7: L-fucose dehydrogenase monomer (EC 1.1.1.435) from Burkholderia multivorans

30% id,
96% cov

XCC4067 / Q8P3K4: 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase (EC 1.1.1.434) from Xanthomonas campestris

28% id,
80% cov

BT1805: electron transfer flavoprotein alpha-subunit (NCBI ptt file)
is similar to:
PaperBLAST

LCTC_ACEWD / H6LBB1: Lactate dehydrogenase (NAD(+),ferredoxin) subunit LctC; Electron transfer flavoprotein large subunit; Electron transfer flavoprotein subunit alpha; EtfA; Lactate dehydrogenase-Etf complex subunit LctC; EC 1.1.1.436 from Acetobacterium woodii

38% id,
78% cov

BT0409: putative short-chain dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

XCC4067 / Q8P3K4: 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase (EC 1.1.1.434) from Xanthomonas campestris

34% id,
75% cov

BT0535: iron-containing alcohol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

SARD_BILW3 / E5Y946: Sulfoacetaldehyde reductase; EC 1.1.1.433 from Bilophila wadsworthia
sarD / E5Y946: sulfoacetaldehyde reductase (NADH) (EC 1.1.1.433) from Bilophila wadsworthia

26% id,
97% cov

SQWF_CLOS9 / J1H1J3: Sulfoacetaldehyde reductase; EC 1.1.1.433 from Clostridium sp.

25% id,
91% cov

BT3361: erythronate-4-phosphate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens

26% id,
92% cov

BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans

30% id,
50% cov

BT1651: pyrophosphorylase (NCBI ptt file)
is similar to:
PaperBLAST

LFUCD_BURM1 / A0A0H3KNE7: L-fucose dehydrogenase; EC 1.1.1.435 from Burkholderia multivorans
BmulJ_04919 / A0A0H3KNE7: L-fucose dehydrogenase monomer (EC 1.1.1.435) from Burkholderia multivorans

28% id,
79% cov

BT1152: D-3-phosphoglycerate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans

29% id,
73% cov

BT1115: aldo/keto reductase (NCBI ptt file)
is similar to:
PaperBLAST

DHGRD_AGRFC / A9CEY6: 6-dehydroglucose reductase; SQ monooxygenase cluster protein B; EC 1.1.1.432 from Agrobacterium fabrum
smoB / A9CEY6: 6-dehydroglucose reductase monomer (EC 1.1.1.432) from Agrobacterium fabrum

25% id,
70% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4891797-4892552 (frame +3) on 241
is similar to:
PaperBLAST

C785_RS13675 / A0A4P7ABK7: 2-dehydro-3-deoxy-D-pentonate/2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase (EC 1.1.1.434) from Herbaspirillum huttiense
Also see hits to annotated proteins above

37% id,
100% cov

4335146-4336207 (frame -3) on 241
is similar to:
PaperBLAST

kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens
Also see hits to annotated proteins above

26% id,
97% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory