Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 4 curated entries in PaperBLAST's database that match '1.1.1.57' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT0825: altronate oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

UxuB / b4323: D-mannonate oxidoreductase (EC 1.1.1.57) from Escherichia coli
uxuB / P39160: D-mannonate oxidoreductase (EC 1.1.1.57) from Escherichia coli

25% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory