Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 11 curated entries in PaperBLAST's database that match '1.1.1.67' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3771: 3-oxoacyl-[acyl-carrier protein] reductase (NCBI ptt file)
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

36% id,
92% cov

BT0130: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

32% id,
95% cov

BT4512: putative zinc-type alcohol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Lactobacillus reuteri

27% id,
95% cov

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

25% id,
95% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

25% id,
95% cov

BT4424: sorbitol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

26% id,
98% cov

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Lactobacillus reuteri

25% id,
98% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

25% id,
98% cov

BT0972: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

24% id,
74% cov

BT0825: altronate oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

R9UHL6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Saccharina japonica

27% id,
65% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory