Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)
Found 7 curated entries in PaperBLAST's database that match '1.1.1.87' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query
| BT1857: 3-isopropylmalate dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
AKSF_METJA / Q58991: Homoisocitrate dehydrogenase; HICDH; Homo(2)-isocitrate/homo(3)-isocitrate dehydrogenase; Isohomocitrate dehydrogenase; IHDH; NAD-dependent threo-isohomocitrate dehydrogenase; EC 1.1.1.87; EC 1.1.1.- from Methanocaldococcus jannaschii | 39% id, 98% cov |
hicdh / Q5SIJ1: homoisocitrate dehydrogenase subunit (EC 1.1.1.87) from Thermus thermophilus | 34% id, 100% cov |
LYS12_SCHPO / O14104: Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.87 from Schizosaccharomyces pombe | 32% id, 95% cov |
| BT2071: isocitrate dehydrogenase [NADP] (NCBI ptt file) is similar to: | PaperBLAST |
LYS12_YEAST / P40495: Homoisocitrate dehydrogenase, mitochondrial; HIcDH; EC 1.1.1.87 from Saccharomyces cerevisiae | 32% id, 94% cov |
AKSF_METJA / Q58991: Homoisocitrate dehydrogenase; HICDH; Homo(2)-isocitrate/homo(3)-isocitrate dehydrogenase; Isohomocitrate dehydrogenase; IHDH; NAD-dependent threo-isohomocitrate dehydrogenase; EC 1.1.1.87; EC 1.1.1.- from Methanocaldococcus jannaschii | 30% id, 98% cov |
LYS12_SCHPO / O14104: Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.87 from Schizosaccharomyces pombe | 28% id, 98% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory