Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 110 curated entries in PaperBLAST's database that match '1.1.1.9'.

These curated entries have 85 distinct sequences.

Running ublast with E ≤ 0.01

Found 20 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT1152: D-3-phosphoglycerate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

EhPGDH: D-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Entamoeba histolytica
Q76KF5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Entamoeba histolytica

49% id,
100% cov

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

28% id,
91% cov

PGDH1 / A2DLU8: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Trichomonas vaginalis

31% id,
78% cov

More...

BT1383: oxidoreductase, aldo/keto reductase (NCBI ptt file)
is similar to:
PaperBLAST

yvgN / O32210: glyoxal/methylglyoxal reductase (EC 1.1.1.283; EC 1.1.1.91) from Bacillus subtilis

49% id,
95% cov

DkgB / b0207: methylglyoxal reductase DkgB (EC 1.1.1.91; EC 1.1.1.346) from Escherichia coli
dkgB / P30863: methylglyoxal reductase DkgB (EC 1.1.1.21; EC 1.1.1.91; EC 1.1.1.346) from Escherichia coli

36% id,
96% cov

BT1911: 7-alpha-hydroxysteroid dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

34% id,
99% cov

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
72% cov

BT1857: 3-isopropylmalate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

TTUC_PSEPU / Q51945: Tartrate dehydrogenase/decarboxylase; TDH; D-malate dehydrogenase [decarboxylating]; EC 1.1.1.93; EC 4.1.1.73; EC 1.1.1.83 from Pseudomonas putida
U05986.1 / Q51945: tartrate dehydrogenase subunit (EC 1.1.1.83; EC 1.1.1.93) from Pseudomonas putida

34% id,
98% cov

YeaU / b1800: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli
dmlA / P76251: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli

34% id,
97% cov

EBL86_19295 / A0A3G6WGL6: L-tartrate dehydrogenase/D-malate dehydrogenase (decarboxylating)/meso-tartrate decarboxylase monomer (EC 1.1.1.83; EC 1.1.1.93) from Cereibacter sphaeroides

32% id,
98% cov

BT3771: 3-oxoacyl-[acyl-carrier protein] reductase (NCBI ptt file)
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

32% id,
100% cov

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
98% cov

BT3617: sorbitol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

M5AJW4: coniferyl-alcohol dehydrogenase (EC 1.1.1.194); aryl-alcohol dehydrogenase (EC 1.1.1.90) from Streptomyces sp.

31% id,
98% cov

Q2Z1W3: aryl-alcohol dehydrogenase (EC 1.1.1.90) from Rhodococcus erythropolis

31% id,
96% cov

Q2K0Q7: D-xylulose reductase (EC 1.1.1.9) from Rhizobium etli

30% id,
99% cov

More...

BT2071: isocitrate dehydrogenase [NADP] (NCBI ptt file)
is similar to:
PaperBLAST

EBL86_19295 / A0A3G6WGL6: L-tartrate dehydrogenase/D-malate dehydrogenase (decarboxylating)/meso-tartrate decarboxylase monomer (EC 1.1.1.83; EC 1.1.1.93) from Cereibacter sphaeroides

32% id,
93% cov

TTUC_PSEPU / Q51945: Tartrate dehydrogenase/decarboxylase; TDH; D-malate dehydrogenase [decarboxylating]; EC 1.1.1.93; EC 4.1.1.73; EC 1.1.1.83 from Pseudomonas putida
U05986.1 / Q51945: tartrate dehydrogenase subunit (EC 1.1.1.83; EC 1.1.1.93) from Pseudomonas putida

30% id,
94% cov

YeaU / b1800: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli
dmlA / P76251: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli

28% id,
93% cov

BT3232: gluconate 5-dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

30% id,
98% cov

BT3361: erythronate-4-phosphate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

31% id,
95% cov

PGDH1 / A2DLU8: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Trichomonas vaginalis

29% id,
72% cov

SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli
SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
serA / RF|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli
serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli
C3SVM7: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli

25% id,
81% cov

More...

BT2123: glycerol-3-phosphate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

GPDA_BACSU / P46919: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; NAD(P)H-dependent dihydroxyacetone-phosphate reductase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; EC 1.1.1.94 from Bacillus subtilis

32% id,
93% cov

gpsA / Q97ID6: glycerol-3-phosphate dehydrogenase (EC 1.1.1.94) from Clostridium acetobutylicum

29% id,
95% cov

Q9ZDA0: glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) from Rickettsia prowazekii

27% id,
98% cov

More...

BT0130: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
100% cov

BT1015: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
97% cov

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

27% id,
98% cov

BT1575: putative dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

29% id,
96% cov

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

29% id,
85% cov

PGDH1 / A2DLU8: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Trichomonas vaginalis

30% id,
73% cov

More...

BT4424: sorbitol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

A0A1B4XTS0: L-arabinitol 4-dehydrogenase (EC 1.1.1.12); D-xylulose reductase (EC 1.1.1.9) from Meyerozyma caribbica

27% id,
98% cov

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

26% id,
97% cov

PS417_17720: xylitol 2-dehydrogenase (EC 1.1.1.9) from Pseudomonas simiae

24% id,
97% cov

More...

BT4512: putative zinc-type alcohol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina

26% id,
96% cov

BPHYT_RS16050: xylitol 2-dehydrogenase (EC 1.1.1.9) from Burkholderia phytofirmans

27% id,
93% cov

DHSO_ARATH / Q9FJ95: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.56; EC 1.1.1.9 from Arabidopsis thaliana

29% id,
88% cov

More...

BT1207: glycerate dehydrogenase (NADH-dependent) (NCBI ptt file)
is similar to:
PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

30% id,
80% cov

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

30% id,
77% cov

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

27% id,
86% cov

More...

BT2679: putative ion-channel protein, putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

Q07747: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Saccharomyces cerevisiae

25% id,
90% cov

P42884: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Saccharomyces cerevisiae

25% id,
84% cov

BT2380: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

28% id,
70% cov

BT1115: aldo/keto reductase (NCBI ptt file)
is similar to:
PaperBLAST

Q8X1V7: aryl-alcohol dehydrogenase (EC 1.1.1.90) from Trametes versicolor

23% id,
78% cov

BT0434: conserved hypothetical protein (NCBI ptt file)
is similar to:
PaperBLAST

GUT2 / P32191: glycerol-3-phosphate dehydrogenase (EC 1.1.1.8; EC 1.1.1.94; EC 1.1.5.3) from Saccharomyces cerevisiae

32% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 18 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

5928744-5929874 (frame +3) on 241
is similar to:
PaperBLAST

xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina
Also see hits to annotated proteins above

26% id,
99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory