Curated BLAST for Genomes


Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 20 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3115: putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydraogenase (NCBI ptt file)
is similar to:

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC from Cupriavidus necator

29% id,
93% cov

P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC from Bacillus subtilis

28% id,
96% cov

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC from Paenarthrobacter nicotinovorans

27% id,
99% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory