Curated BLAST for Genomes


Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 9 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3115: putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydraogenase (NCBI ptt file)
is similar to:

mmsA / P42412: (methyl)malonate-semialdehyde dehydrogenase monomer (EC; EC from Bacillus subtilis

26% id,
92% cov

SMc00781: malonate-semialdehyde dehydrogenase (acetylating) (EC from Sinorhizobium meliloti

26% id,
85% cov

PS417_10925: malonate-semialdehyde dehydrogenase (acetylating) (EC from Pseudomonas simiae

24% id,
86% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory