Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 15 curated entries in PaperBLAST's database that match '1.2.1.22' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3115: putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydraogenase (NCBI ptt file)
is similar to:
PaperBLAST

Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus

28% id,
94% cov

ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii

27% id,
89% cov

ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli
Ald / b1415: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
aldA / P25553: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
P25553: lactaldehyde dehydrogenase (EC 1.2.1.22); D-glyceraldehyde dehydrogenase (NADP+) (EC 1.2.1.89) from Escherichia coli

25% id,
90% cov

BT1911: 7-alpha-hydroxysteroid dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis

32% id,
38% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

29% id,
37% cov

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

28% id,
37% cov

More...

BT3771: 3-oxoacyl-[acyl-carrier protein] reductase (NCBI ptt file)
is similar to:
PaperBLAST

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

32% id,
37% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

30% id,
37% cov

Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis

30% id,
36% cov

BT3232: gluconate 5-dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis

31% id,
37% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

30% id,
37% cov

rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis

28% id,
37% cov

More...

BT0130: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

28% id,
38% cov

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

27% id,
37% cov

BT1433: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus

26% id,
39% cov

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

26% id,
37% cov

Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis

31% id,
25% cov

BT0972: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis

25% id,
26% cov

BT1651: pyrophosphorylase (NCBI ptt file)
is similar to:
PaperBLAST

rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis

29% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory