Curated BLAST for Genomes


Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 20 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT1806: acyl-CoA dehydrogenase (NCBI ptt file)
is similar to:

AO353_25670: isobutyryl-CoA dehydrogenase (EC from Pseudomonas fluorescens

34% id,
90% cov

PfGW456L13_2985: isobutyryl-CoA dehydrogenase (EC from Pseudomonas fluorescens

33% id,
94% cov

Ac3H11_2996: 2-methyl-branched-chain-enoyl-CoA reductase (EC from Acidovorax sp.

33% id,
94% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory