Curated BLAST for Genomes


Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 8 curated entries in PaperBLAST's database that match ''.

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT1806: acyl-CoA dehydrogenase (NCBI ptt file)
is similar to:

GCDH_HUMAN / Q92947: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC from Homo sapiens
Q92947: glutaryl-CoA dehydrogenase (ETF) (EC from Homo sapiens

26% id,
77% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory