Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 33 curated entries in PaperBLAST's database that match '1.5.1.2' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3757: pyrroline-5-carboxylate reductase (NCBI ptt file)
is similar to:
PaperBLAST

BT3757: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Bacteroides thetaiotaomicron

100% id,
100% cov

CA265_RS18505: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Pedobacter sp.

41% id,
95% cov

G7KRM5: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Medicago truncatula

34% id,
95% cov

More...

BT1902: pyrroline-5-carboxylate reductase (NCBI ptt file)
is similar to:
PaperBLAST

BT3757: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Bacteroides thetaiotaomicron

52% id,
100% cov

CA265_RS18505: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Pedobacter sp.

35% id,
99% cov

P5CR_KLULA / Q6CR99: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; EC 1.5.1.2 from Kluyveromyces lactis

28% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory