Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 63 curated entries in PaperBLAST's database that match '1.8.1.4' as complete word(s).

These curated entries have 47 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT0309: Dihydrolipoamide dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

51% id,
89% cov

pdhD / P75393: pyruvate dehydrogenase complex E3 component (EC 1.8.1.4) from Mycoplasma pneumoniae

37% id,
98% cov

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

37% id,
95% cov

More...

BT3186: dihydrolipoamide dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

49% id,
89% cov

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

40% id,
97% cov

A5N930: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri

38% id,
99% cov

More...

BT1542: putative pyridine nucleotide-disulfide oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

A5N930: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri

32% id,
99% cov

DLDH_MYCTU / P9WHH9: Dihydrolipoyl dehydrogenase; LPD; Component of peroxynitrite reductase/peroxidase complex; Component of PNR/P; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Mycobacterium tuberculosis
P9WHH8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Mycobacterium tuberculosis
P9WHH9: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Mycobacterium tuberculosis

31% id,
98% cov

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

31% id,
97% cov

More...

BT2407: NAD-utilizing dehydrogenases (NCBI ptt file)
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

35% id,
64% cov

DLDH_AZOVI / P18925: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Azotobacter vinelandii
GI|142325: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Azotobacter vinelandii

24% id,
36% cov

lpdG / GI|1256717: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Pseudomonas putida

23% id,
36% cov

More...

BT2434: pyridine nucleotide-disulphide oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

DLDH_PEA / P31023: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; Glycine cleavage system L protein; Pyruvate dehydrogenase complex E3 subunit; E3; PDC-E3; EC 1.8.1.4 from Pisum sativum

27% id,
79% cov

DLDH1_ARATH / Q9M5K3: Dihydrolipoyl dehydrogenase 1, mitochondrial; AtmLPD1; mtLPD1; Dihydrolipoamide dehydrogenase 1; Glycine cleavage system L protein 1; Pyruvate dehydrogenase complex E3 subunit 1; E3-1; PDC-E3 1; EC 1.8.1.4 from Arabidopsis thaliana

26% id,
78% cov

B6F1A8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Microbacterium luteolum

28% id,
71% cov

More...

BT4336: thioredoxin reductase (NCBI ptt file)
is similar to:
PaperBLAST

AO356_22975: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

25% id,
70% cov

Pf6N2E2_478: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

25% id,
70% cov

PS417_17560: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas simiae

24% id,
70% cov

More...

BT1554: alanine dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

A4V929: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Acidianus ambivalens

28% id,
58% cov

BT2811: alkyl hydroperoxide reductase subunit F (NCBI ptt file)
is similar to:
PaperBLAST

DLDH_PEA / P31023: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; Glycine cleavage system L protein; Pyruvate dehydrogenase complex E3 subunit; E3; PDC-E3; EC 1.8.1.4 from Pisum sativum

25% id,
65% cov

DLDH2_ARATH / Q9M5K2: Dihydrolipoyl dehydrogenase 2, mitochondrial; AtmLPD2; mtLPD2; Dihydrolipoamide dehydrogenase 2; Glycine cleavage system L protein 2; Pyruvate dehydrogenase complex E3 subunit 2; E3-2; PDC-E3 2; EC 1.8.1.4 from Arabidopsis thaliana
Q9M5K2: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Arabidopsis thaliana

24% id,
63% cov

LPD1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Candida albicans

23% id,
51% cov

More...

BT4310: NADPH-dependent glutamate synthase small chain (NCBI ptt file)
is similar to:
PaperBLAST

DLDH_MESAU / Q811C4: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Mesocricetus auratus

23% id,
68% cov

DLD / Q9XLX6: dihydrolipoyl dehydrogenase subunit (EC 1.8.1.4) from Ascaris suum

23% id,
67% cov

pdhD / GB|CAB13334.1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Bacillus subtilis
pdhD / P21880: dihydrolipoyl dehydrogenase component subunit (EC 1.8.1.4) from Bacillus subtilis

24% id,
60% cov

More...

BT0829: UDP-glucose 6-dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

DLDH1_ARATH / Q9M5K3: Dihydrolipoyl dehydrogenase 1, mitochondrial; AtmLPD1; mtLPD1; Dihydrolipoamide dehydrogenase 1; Glycine cleavage system L protein 1; Pyruvate dehydrogenase complex E3 subunit 1; E3-1; PDC-E3 1; EC 1.8.1.4 from Arabidopsis thaliana

22% id,
42% cov

DLDH2_ARATH / Q9M5K2: Dihydrolipoyl dehydrogenase 2, mitochondrial; AtmLPD2; mtLPD2; Dihydrolipoamide dehydrogenase 2; Glycine cleavage system L protein 2; Pyruvate dehydrogenase complex E3 subunit 2; E3-2; PDC-E3 2; EC 1.8.1.4 from Arabidopsis thaliana
Q9M5K2: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Arabidopsis thaliana

21% id,
32% cov

DLDH1_GEOSE / P11959: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Geobacillus stearothermophilus
pdhD / GB|CAA37631.1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Geobacillus stearothermophilus
P11959: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Geobacillus stearothermophilus

30% id,
22% cov

More...

BT0311: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (NCBI ptt file)
is similar to:
PaperBLAST

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

30% id,
31% cov

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

31% id,
26% cov

BT0552: glutamate synthase, small subunit (NCBI ptt file)
is similar to:
PaperBLAST

Q04829: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Haloferax volcanii

25% id,
34% cov

BT2458: putative pyridine nucleotide-disulphide oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

A0A0K9R8G5: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Spinacia oleracea

31% id,
22% cov

DLDH_CORGL / Q8NTE1: Dihydrolipoyl dehydrogenase; LPD; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Corynebacterium glutamicum

36% id,
18% cov

A0A0H2ZHZ0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

38% id,
15% cov

More...

BT3268: glucose-inhibited division protein A (NCBI ptt file)
is similar to:
PaperBLAST

A5N930: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri

40% id,
14% cov

DLDH_AZOVI / P18925: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Azotobacter vinelandii
GI|142325: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Azotobacter vinelandii

49% id,
10% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

47% id,
10% cov

More...

BT0434: conserved hypothetical protein (NCBI ptt file)
is similar to:
PaperBLAST

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

33% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 15 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory