Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 84 curated entries in PaperBLAST's database that match '2.1.1.14'.

These curated entries have 55 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT4216: ubiquinone/menaquinone biosynthesis methyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

A0A2U7MCR4: cycloartenol 24-C-methyltransferase (EC 2.1.1.142) from Tripterygium wilfordii

23% id,
54% cov

Q43445: cycloartenol 24-C-methyltransferase (EC 2.1.1.142) from Glycine max

23% id,
50% cov

Q96WX4: cycloartenol 24-C-methyltransferase (EC 2.1.1.142); sterol 24-C-methyltransferase (EC 2.1.1.41) from Pneumocystis carinii

27% id,
42% cov

More...

BT2972: conserved hypothetical protein (NCBI ptt file)
is similar to:
PaperBLAST

SMT3 / Q94JS4: sterol methyltransferase (EC 2.1.1.143) from Arabidopsis thaliana

27% id,
37% cov

A8IJ34: cycloartenol 24-C-methyltransferase (EC 2.1.1.142); 24-methylenesterol C-methyltransferase (EC 2.1.1.143); sterol 24-C-methyltransferase (EC 2.1.1.41) from Chlamydomonas reinhardtii

21% id,
40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

5552884-5553660 (frame -1) on 241
is similar to:
PaperBLAST

Q96WX4: cycloartenol 24-C-methyltransferase (EC 2.1.1.142); sterol 24-C-methyltransferase (EC 2.1.1.41) from Pneumocystis carinii
Also see hits to annotated proteins above

25% id,
59% cov

A0A2U7MCR4: cycloartenol 24-C-methyltransferase (EC 2.1.1.142) from Tripterygium wilfordii
Also see hits to annotated proteins above

23% id,
58% cov

Q43445: cycloartenol 24-C-methyltransferase (EC 2.1.1.142) from Glycine max
Also see hits to annotated proteins above

23% id,
53% cov

3752303-3753097 (frame +2) on 241
is similar to:
PaperBLAST

SMT3 / Q94JS4: sterol methyltransferase (EC 2.1.1.143) from Arabidopsis thaliana
Also see hits to annotated proteins above

25% id,
46% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory