Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 48 curated entries in PaperBLAST's database that match '2.1.3.3' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT0742: aspartate carbamoyltransferase catalytic chain (NCBI ptt file)
is similar to:
PaperBLAST

OTCA_PYRFU / Q51742: Ornithine carbamoyltransferase, anabolic; OTCase; EC 2.1.3.3 from Pyrococcus furiosus
Q51742: ornithine carbamoyltransferase (EC 2.1.3.3) from Pyrococcus furiosus

29% id,
97% cov

Q98BB6: ornithine carbamoyltransferase (EC 2.1.3.3) from Mesorhizobium loti

28% id,
100% cov

O93656: ornithine carbamoyltransferase (EC 2.1.3.3) from Pyrococcus abyssi

29% id,
97% cov

More...

BT3717: ornithine carbamoyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

O93656: ornithine carbamoyltransferase (EC 2.1.3.3) from Pyrococcus abyssi

29% id,
97% cov

OTCA_PYRFU / Q51742: Ornithine carbamoyltransferase, anabolic; OTCase; EC 2.1.3.3 from Pyrococcus furiosus
Q51742: ornithine carbamoyltransferase (EC 2.1.3.3) from Pyrococcus furiosus

29% id,
97% cov

HSERO_RS07185: Ornithine carbamoyltransferase (EC 2.1.3.3) from Herbaspirillum seropedicae

28% id,
93% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory