Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 3 curated entries in PaperBLAST's database that match '2.2.1.11' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT1106: fructose-bisphosphate aldolase class I (NCBI ptt file)
is similar to:
PaperBLAST

DKFP_METJA / Q58980: Fructose-bisphosphate aldolase/6-deoxy-5-ketofructose 1-phosphate synthase; DKFP synthase; Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 2.2.1.11; EC 4.1.2.13 from Methanocaldococcus jannaschii
MJ1585 / Q58980: fructose 1,6-bisphosphate aldolase monomer (EC 2.2.1.11; EC 4.1.2.13) from Methanocaldococcus jannaschii
Q58980: 6-deoxy-5-ketofructose 1-phosphate synthase (EC 2.2.1.11) from Methanocaldococcus jannaschii

29% id,
84% cov

BT1659: fructose-bisphosphate aldolase class I (NCBI ptt file)
is similar to:
PaperBLAST

DKFP_METJA / Q58980: Fructose-bisphosphate aldolase/6-deoxy-5-ketofructose 1-phosphate synthase; DKFP synthase; Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 2.2.1.11; EC 4.1.2.13 from Methanocaldococcus jannaschii
MJ1585 / Q58980: fructose 1,6-bisphosphate aldolase monomer (EC 2.2.1.11; EC 4.1.2.13) from Methanocaldococcus jannaschii
Q58980: 6-deoxy-5-ketofructose 1-phosphate synthase (EC 2.2.1.11) from Methanocaldococcus jannaschii

31% id,
58% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory