Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 14 curated entries in PaperBLAST's database that match '2.3.1.29' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT1371: 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file)
is similar to:
PaperBLAST

Shewana3_4104: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Shewanella sp.

61% id,
98% cov

KBL_ECOLI / P0AB77: 2-amino-3-ketobutyrate coenzyme A ligase; AKB ligase; Glycine acetyltransferase; EC 2.3.1.29 from Escherichia coli
Kbl / b3617: 2-amino-3-ketobutyrate CoA ligase (EC 2.3.1.29) from Escherichia coli
kbl: 2-amino-3-ketobutyrate coenzyme A ligase; EC 2.3.1.29 from Escherichia coli
kbl / P0AB77: 2-amino-3-ketobutyrate CoA ligase (EC 2.3.1.29) from Escherichia coli
P0AB77: glycine C-acetyltransferase (EC 2.3.1.29) from Escherichia coli

59% id,
100% cov

BWI76_RS27255: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Klebsiella michiganensis

58% id,
100% cov

More...

BT0870: 8-amino-7-oxononanoate synthase (NCBI ptt file)
is similar to:
PaperBLAST

PGA1_c34330: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Phaeobacter inhibens

37% id,
96% cov

BIKB_THET8 / Q5SHZ8: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; Glycine acetyltransferase; EC 2.3.1.29; EC 2.3.1.47 from Thermus thermophilus

37% id,
96% cov

KBL_ECOLI / P0AB77: 2-amino-3-ketobutyrate coenzyme A ligase; AKB ligase; Glycine acetyltransferase; EC 2.3.1.29 from Escherichia coli
Kbl / b3617: 2-amino-3-ketobutyrate CoA ligase (EC 2.3.1.29) from Escherichia coli
kbl: 2-amino-3-ketobutyrate coenzyme A ligase; EC 2.3.1.29 from Escherichia coli
kbl / P0AB77: 2-amino-3-ketobutyrate CoA ligase (EC 2.3.1.29) from Escherichia coli
P0AB77: glycine C-acetyltransferase (EC 2.3.1.29) from Escherichia coli

35% id,
95% cov

More...

BT1443: 8-amino-7-oxononanoate synthase (NCBI ptt file)
is similar to:
PaperBLAST

BIKB_THET8 / Q5SHZ8: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; Glycine acetyltransferase; EC 2.3.1.29; EC 2.3.1.47 from Thermus thermophilus

36% id,
97% cov

KBL_ECOLI / P0AB77: 2-amino-3-ketobutyrate coenzyme A ligase; AKB ligase; Glycine acetyltransferase; EC 2.3.1.29 from Escherichia coli
Kbl / b3617: 2-amino-3-ketobutyrate CoA ligase (EC 2.3.1.29) from Escherichia coli
kbl: 2-amino-3-ketobutyrate coenzyme A ligase; EC 2.3.1.29 from Escherichia coli
kbl / P0AB77: 2-amino-3-ketobutyrate CoA ligase (EC 2.3.1.29) from Escherichia coli
P0AB77: glycine C-acetyltransferase (EC 2.3.1.29) from Escherichia coli

34% id,
94% cov

BWI76_RS27255: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Klebsiella michiganensis

33% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory