Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 28 curated entries in PaperBLAST's database that match '2.3.1.8' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3692: phosphate acetyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

B2RK03: phosphate acetyltransferase (EC 2.3.1.8) from Porphyromonas gingivalis

64% id,
100% cov

pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum

53% id,
99% cov

O52593: phosphate acetyltransferase (EC 2.3.1.8) from Acetivibrio thermocellus

52% id,
100% cov

More...

BT2551: phosphate butyryltransferase (NCBI ptt file)
is similar to:
PaperBLAST

CH_090885: phosphate acetyltransferase; EC 2.3.1.8 from Thermotoga maritima

35% id,
96% cov

B2RK03: phosphate acetyltransferase (EC 2.3.1.8) from Porphyromonas gingivalis

27% id,
97% cov

O52593: phosphate acetyltransferase (EC 2.3.1.8) from Acetivibrio thermocellus

27% id,
90% cov

More...

BT1969: NADP-dependent malate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

O52593: phosphate acetyltransferase (EC 2.3.1.8) from Acetivibrio thermocellus

33% id,
98% cov

pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum

32% id,
98% cov

B2RK03: phosphate acetyltransferase (EC 2.3.1.8) from Porphyromonas gingivalis

30% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory