Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 179 curated entries in PaperBLAST's database that match '2.4.1.13'.

These curated entries have 114 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT2864: putative glycosyltransferase involved in lipopolysaccharide biosynthesis (NCBI ptt file)
is similar to:
PaperBLAST

A6MF03: GDP-Man:Man1GlcNAc2-PP-dolichol alpha-1,3-mannosyltransferase (EC 2.4.1.132) from Escherichia coli

44% id,
98% cov

BT0055: putative glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

A6MF03: GDP-Man:Man1GlcNAc2-PP-dolichol alpha-1,3-mannosyltransferase (EC 2.4.1.132) from Escherichia coli

39% id,
97% cov

BT4282: glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

A6MF03: GDP-Man:Man1GlcNAc2-PP-dolichol alpha-1,3-mannosyltransferase (EC 2.4.1.132) from Escherichia coli

21% id,
95% cov

BT2936: putative glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

A6MF03: GDP-Man:Man1GlcNAc2-PP-dolichol alpha-1,3-mannosyltransferase (EC 2.4.1.132) from Escherichia coli

24% id,
83% cov

BAB20799.1: sucrose synthase 1 (Sus1;PypSUS1) (EC 2.4.1.13)

25% id,
42% cov

SUS4_ORYSJ / Q10LP5: Sucrose synthase 4; OsSUS4; Sucrose-UDP glucosyltransferase 4; EC 2.4.1.13 from Oryza sativa

29% id,
30% cov

More...

BT0053: glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

A6MF03: GDP-Man:Man1GlcNAc2-PP-dolichol alpha-1,3-mannosyltransferase (EC 2.4.1.132) from Escherichia coli

32% id,
55% cov

BT1712: glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

SUS4_ORYSJ / Q10LP5: Sucrose synthase 4; OsSUS4; Sucrose-UDP glucosyltransferase 4; EC 2.4.1.13 from Oryza sativa

22% id,
44% cov

SUS_DENA2 / D4H6M0: Sucrose synthase; SuSyDa; EC 2.4.1.13 from Denitrovibrio acetiphilus
ADD69694.1: sucrose synthase (SuSyDa;Dacet_2944) (EC 2.4.1.13)
D4H6M0: sucrose synthase (EC 2.4.1.13) from Denitrovibrio acetiphilus

20% id,
43% cov

E0Z1D1: sucrose synthase (EC 2.4.1.13) from Solanum lycopersicum

23% id,
38% cov

More...

BT2946: putative glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

Q0E7D4: sucrose synthase (EC 2.4.1.13) from Coffea arabica

26% id,
30% cov

E0Z1D0: sucrose synthase (EC 2.4.1.13) from Solanum lycopersicum

23% id,
30% cov

P49037: sucrose synthase (EC 2.4.1.13) from Solanum lycopersicum

23% id,
30% cov

More...

BT4304: putative glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

SUS6_ARATH / Q9FX32: Sucrose synthase 6; AtSUS6; Sucrose-UDP glucosyltransferase 6; EC 2.4.1.13 from Arabidopsis thaliana
SUS6 / Q9FX32: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana
Q9FX32: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana

19% id,
31% cov

SUS7_ORYSJ / Q7XNX6: Sucrose synthase 7; OsSUS7; Sucrose-UDP glucosyltransferase 7; EC 2.4.1.13 from Oryza sativa

19% id,
20% cov

SUS5_ORYSJ / H6TFZ4: Sucrose synthase 5; OsSUS5; Sucrose-UDP glucosyltransferase 5; EC 2.4.1.13 from Oryza sativa

19% id,
20% cov

More...

BT0391: putative protein involved in capsular polysaccharide biosynthesis (NCBI ptt file)
is similar to:
PaperBLAST

SUS_MELRP / I7A3T6: Sucrose synthase; SuSyMr; EC 2.4.1.13 from Melioribacter roseus
AFN74551.1: sucrose synthase (SuSyMr;MROS_1314) (EC 2.4.1.13)
I7A3T6: sucrose synthase (EC 2.4.1.13) from Melioribacter roseus

29% id,
19% cov

BT1180: putative glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

CAB38022.1: sucrose synthase (Ss2) (EC 2.4.1.13)

29% id,
17% cov

Q84T18: sucrose synthase (EC 2.4.1.13) from Solanum tuberosum

27% id,
17% cov

E0Z1D1: sucrose synthase (EC 2.4.1.13) from Solanum lycopersicum

27% id,
17% cov

More...

BT0394: capsular polysaccharide biosynthesis glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

SUS_DENA2 / D4H6M0: Sucrose synthase; SuSyDa; EC 2.4.1.13 from Denitrovibrio acetiphilus
ADD69694.1: sucrose synthase (SuSyDa;Dacet_2944) (EC 2.4.1.13)
D4H6M0: sucrose synthase (EC 2.4.1.13) from Denitrovibrio acetiphilus

19% id,
18% cov

BT2148: glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

SUS_THEVB / Q8DK23: Sucrose synthase; SuSyTe; EC 2.4.1.13 from Thermosynechococcus vestitus
BAC08600.1: ADP-Glc: sucrose synthase (SusA;Te-SuS;Tlr1047) (EC 2.4.1.13)

39% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1457578-1458135 (frame -1) on 241
is similar to:
PaperBLAST

BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)
Also see hits to annotated proteins above

57% id,
3% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory