Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 37 curated entries in PaperBLAST's database that match '2.4.1.7'.

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3379: putative glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

GtrB / b2351: CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase (EC 2.4.1.78) from Escherichia coli
yfdH / P77293: CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase (EC 2.4.1.78) from Escherichia coli

43% id,
99% cov

BT4564: putative glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

GtrB / b2351: CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase (EC 2.4.1.78) from Escherichia coli
yfdH / P77293: CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase (EC 2.4.1.78) from Escherichia coli

31% id,
99% cov

BT2866: putative glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

TARM_STAAC / A0A0H2WWV6: Poly(ribitol-phosphate) alpha-N-acetylglucosaminyltransferase; WTA GlcNAc-transferase; EC 2.4.1.70 from Staphylococcus aureus
tarM / A0A0D6HUA0: poly(ribitol phosphate) teichoic acid α-O-GlcNAc transferase monomer (EC 2.4.1.70) from Staphylococcus aureus

27% id,
64% cov

BT0053: glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

TARM_STAAC / A0A0H2WWV6: Poly(ribitol-phosphate) alpha-N-acetylglucosaminyltransferase; WTA GlcNAc-transferase; EC 2.4.1.70 from Staphylococcus aureus
tarM / A0A0D6HUA0: poly(ribitol phosphate) teichoic acid α-O-GlcNAc transferase monomer (EC 2.4.1.70) from Staphylococcus aureus

25% id,
64% cov

BT1180: putative glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

TARM_STAAC / A0A0H2WWV6: Poly(ribitol-phosphate) alpha-N-acetylglucosaminyltransferase; WTA GlcNAc-transferase; EC 2.4.1.70 from Staphylococcus aureus
tarM / A0A0D6HUA0: poly(ribitol phosphate) teichoic acid α-O-GlcNAc transferase monomer (EC 2.4.1.70) from Staphylococcus aureus

33% id,
47% cov

BT1712: glycosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

TARM_STAAC / A0A0H2WWV6: Poly(ribitol-phosphate) alpha-N-acetylglucosaminyltransferase; WTA GlcNAc-transferase; EC 2.4.1.70 from Staphylococcus aureus
tarM / A0A0D6HUA0: poly(ribitol phosphate) teichoic acid α-O-GlcNAc transferase monomer (EC 2.4.1.70) from Staphylococcus aureus

19% id,
66% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory