Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 197 curated entries in PaperBLAST's database that match '2.4.2.1'.

These curated entries have 142 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT0530: anthranilate phosphoribosyltransferase (NCBI ptt file)
is similar to:		 PaperBLAST

BT0530: anthranilate phosphoribosyltransferase (EC 2.4.2.18) from Bacteroides thetaiotaomicron

 100% id,
100% cov

CA265_RS05010: anthranilate phosphoribosyltransferase (EC 2.4.2.18) from Pedobacter sp.

 51% id,
99% cov

TRPD2_NOSS1 / Q8YXQ9: Anthranilate phosphoribosyltransferase 2; EC 2.4.2.18 from Nostoc sp.

 33% id,
94% cov

More...

BT4389: conserved hypothetical protein (NCBI ptt file)
is similar to:		 PaperBLAST

PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron

 100% id,
100% cov

PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.1; EC 2.4.2.28 from Unknown prokaryotic

 39% id,
99% cov

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli
yfiH / P33644: purine nucleoside phosphorylase YfiH (EC 2.4.2.1; EC 2.4.2.28; EC 3.5.4.4; EC 1.10.3.2) from Escherichia coli

 32% id,
92% cov

More...

BT1881: purine nucleoside phosphorylase I (NCBI ptt file)
is similar to:		 PaperBLAST

A0A3G5E8S8: purine-nucleoside phosphorylase (EC 2.4.2.1) from Aneurinibacillus migulanus

 50% id,
100% cov

PUNA_GEOSE / P77834: Purine nucleoside phosphorylase 1; PNP 1; Inosine phosphorylase; Inosine-guanosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; Pu-NPase I; EC 2.4.2.1 from Geobacillus stearothermophilus
P77834: purine-nucleoside phosphorylase (EC 2.4.2.1) from Geobacillus stearothermophilus

 51% id,
97% cov

P85973: purine-nucleoside phosphorylase (EC 2.4.2.1) from Rattus norvegicus

 50% id,
95% cov

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BT3731: orotate phosphoribosyltransferase (NCBI ptt file)
is similar to:		 PaperBLAST

PYRE_BACCL / P46534: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Bacillus caldolyticus

 50% id,
98% cov

PYRE_BACSU / P25972: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Bacillus subtilis
pyrE / P25972: orotate phosphoribosyltransferase (EC 2.4.2.10) from Bacillus subtilis

 52% id,
95% cov

Q8DTV2: orotate phosphoribosyltransferase (EC 2.4.2.10) from Streptococcus mutans

 49% id,
99% cov

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BT0200: ATP phosphoribosyltransferase (NCBI ptt file)
is similar to:		 PaperBLAST

HIS1_SALTY / P00499: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Salmonella typhimurium

 47% id,
98% cov

Q9PM78: ATP phosphoribosyltransferase (EC 2.4.2.17) from Campylobacter jejuni
Q5HSJ4: ATP phosphoribosyltransferase (EC 2.4.2.17) from Campylobacter jejuni

 46% id,
98% cov

HIS1_ECOLI / P60757: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Escherichia coli
HisG / b2019: ATP phosphoribosyltransferase (EC 2.4.2.17) from Escherichia coli
hisG / P60757: ATP phosphoribosyltransferase (EC 2.4.2.17) from Escherichia coli

 46% id,
98% cov

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BT3929: triosephosphate isomerase (NCBI ptt file)
is similar to:		 PaperBLAST

P00941: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens

 46% id,
95% cov

BT1560: nicotinate-nucleotide pyrophosphorylase (NCBI ptt file)
is similar to:		 PaperBLAST

NADC_MYCTU / P9WJJ7: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Mycobacterium tuberculosis
P9WJJ7: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Mycobacterium tuberculosis

 43% id,
93% cov

Q5XBL7: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Streptococcus pyogenes

 39% id,
94% cov

QPT1A_TOBAC / A0A1S4D475: Quinolinate phosphoribosyltransferase [decarboxylating] 1a; NtQPT1a; EC 2.4.2.19 from Nicotiana tabacum

 45% id,
81% cov

More...

BT4582: amidophosphoribosyltransferase precursor (NCBI ptt file)
is similar to:		 PaperBLAST

PUR1_CHICK / P28173: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPAT; EC 2.4.2.14 from Gallus gallus

 28% id,
96% cov

PUR1_RAT / P35433: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPAT; EC 2.4.2.14 from Rattus norvegicus

 27% id,
96% cov

PUR1_HUMAN / Q06203: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPAT; EC 2.4.2.14 from Homo sapiens
PPAT / Q06203: Amidophosphoribosyltransferase (EC 2.4.2.14) from Homo sapiens
Q06203: amidophosphoribosyltransferase (EC 2.4.2.14); pantetheine-phosphate adenylyltransferase (EC 2.7.7.3) from Homo sapiens

 27% id,
96% cov

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BT4554: purine nucleoside phosphorylase II (NCBI ptt file)
is similar to:		 PaperBLAST

P77835: purine-nucleoside phosphorylase (EC 2.4.2.1) from Geobacillus stearothermophilus

 27% id,
97% cov

PNPH_SACS2 / P50389: Purine nucleoside phosphorylase; PNP; 5'-methylthioadenosine phosphorylase I; MTA phosphorylase I; MTAPI; EC 2.4.2.1; EC 2.4.2.28 from Saccharolobus solfataricus

 33% id,
55% cov

O34925: purine-nucleoside phosphorylase (EC 2.4.2.1) from Bacillus subtilis

 33% id,
50% cov

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BT0888: AMP nucleosidase (NCBI ptt file)
is similar to:		 PaperBLAST

C8CPR9: purine-nucleoside phosphorylase (EC 2.4.2.1) from Pseudoalteromonas sp.

 26% id,
98% cov

B9LS20: guanosine phosphorylase (EC 2.4.2.15) from Halorubrum lacusprofundi

 24% id,
81% cov

Q72IR2: purine-nucleoside phosphorylase (EC 2.4.2.1) from Thermus thermophilus

 25% id,
74% cov

BT0554: glucosamine--fructose-6-phosphate aminotransferase (NCBI ptt file)
is similar to:		 PaperBLAST

PUR1_YEAST / P04046: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; EC 2.4.2.14 from Saccharomyces cerevisiae
ADE4 / P04046: phosphoribosylpyrophosphate amidotransferase (EC 2.4.2.14) from Saccharomyces cerevisiae

 25% id,
77% cov

ASE3_ARATH / Q9T0J5: Amidophosphoribosyltransferase 3, chloroplastic; AtATase3; PRPP3; Glutamine phosphoribosylpyrophosphate amidotransferase 3; AtGPRAT3; EC 2.4.2.14 from Arabidopsis thaliana
Q9T0J5: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 25% id,
69% cov

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

 33% id,
46% cov

More...

BT0555: amidophosphoribosyltransferase (NCBI ptt file)
is similar to:		 PaperBLAST

PUR1_ECOLI / P0AG16: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Escherichia coli
Ade / b2312: amidophosphoribosyltransferase (EC 2.4.2.14) from Escherichia coli
purF / P0AG16: amidophosphoribosyltransferase (EC 2.4.2.14) from Escherichia coli

 25% id,
60% cov

PUR1_ECOLI / P0AG16: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Escherichia coli
Ade / b2312: amidophosphoribosyltransferase (EC 2.4.2.14) from Escherichia coli
purF / P0AG16: amidophosphoribosyltransferase (EC 2.4.2.14) from Escherichia coli

 33% id,
26% cov

ASE2_ARATH / Q9STG9: Amidophosphoribosyltransferase 2, chloroplastic; AtATase2; AtPURF2; PRPP2; Glutamine phosphoribosylpyrophosphate amidotransferase 2; AtGPRAT2; Protein CHLOROPLAST IMPORT APPARATUS 1; Protein DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS; EC 2.4.2.14 from Arabidopsis thaliana
Q9STG9: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 25% id,
25% cov

More...

BT0531: anthranilate synthase component II (NCBI ptt file)
is similar to:		 PaperBLAST

TRPGD_ECOLI / P00904: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Escherichia coli
TrpD / b1263: anthranilate synthase subunit TrpD (EC 2.4.2.18; EC 4.1.3.27) from Escherichia coli
trpD / P00904: anthranilate synthase subunit TrpD (EC 2.4.2.18) from Escherichia coli

 42% id,
35% cov

TRPGD_SALTY / P00905: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Salmonella typhimurium

 41% id,
35% cov

BT4265: GMP synthase (glutamine-hydrolyzing) (NCBI ptt file)
is similar to:		 PaperBLAST

TRPGD_SALTY / P00905: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Salmonella typhimurium

 27% id,
31% cov

TRPGD_ECOLI / P00904: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Escherichia coli
TrpD / b1263: anthranilate synthase subunit TrpD (EC 2.4.2.18; EC 4.1.3.27) from Escherichia coli
trpD / P00904: anthranilate synthase subunit TrpD (EC 2.4.2.18) from Escherichia coli

 29% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

215052-215939 (frame +3) on 241
is similar to:		 PaperBLAST

HIS1_SALTY / P00499: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Salmonella typhimurium
Also see hits to annotated proteins above

 46% id,
100% cov

G7JFL4: ATP phosphoribosyltransferase (EC 2.4.2.17) from Medicago truncatula
Also see hits to annotated proteins above

 29% id,
87% cov

Q56UT2: ATP phosphoribosyltransferase (EC 2.4.2.17) from Odontarrhena lesbiaca
Also see hits to annotated proteins above

 30% id,
79% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory