Curated BLAST for Genomes


Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 53 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 35 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT4389: conserved hypothetical protein (NCBI ptt file)
is similar to:

PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC; EC; EC from Bacteroides thetaiotaomicron

100% id,
100% cov

PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC; EC 1.10.3.-; EC; EC from Unknown prokaryotic

39% id,
99% cov

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC; EC; EC 1.10.3.-; EC from Escherichia coli

32% id,
92% cov


BT1881: purine nucleoside phosphorylase I (NCBI ptt file)
is similar to:

PUNA_GEOSE / P77834: Purine nucleoside phosphorylase 1; PNP 1; Inosine phosphorylase; Inosine-guanosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; Pu-NPase I; EC from Geobacillus stearothermophilus

51% id,
97% cov

P55859: purine-nucleoside phosphorylase (EC from Bos taurus

49% id,
94% cov

PNPH_MOUSE / P23492: Purine nucleoside phosphorylase; PNP; Inosine phosphorylase; Inosine-guanosine phosphorylase; EC from Mus musculus

48% id,
95% cov


BT0888: AMP nucleosidase (NCBI ptt file)
is similar to:

C8CPR9: purine-nucleoside phosphorylase (EC from Pseudoalteromonas sp.

26% id,
98% cov

Q72IR2: purine-nucleoside phosphorylase (EC from Thermus thermophilus

25% id,
74% cov

BT4554: purine nucleoside phosphorylase II (NCBI ptt file)
is similar to:

PNPH_SACS2 / P50389: Purine nucleoside phosphorylase; PNP; 5'-methylthioadenosine phosphorylase I; MTA phosphorylase I; MTAPI; EC; EC from Saccharolobus solfataricus

33% id,
55% cov

O34925: purine-nucleoside phosphorylase (EC from Bacillus subtilis

33% id,
50% cov

deoD: purine nucleoside phosphorylase; EC from Bacillus anthracis

31% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory