Curated BLAST
Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)
Found 39 curated entries in PaperBLAST's database that match '2.4.2.17' as complete word(s).
These curated entries have 33 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query
BT0200: ATP phosphoribosyltransferase (NCBI ptt file) is similar to: | PaperBLAST |
HIS1_SALTY / P00499: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Salmonella typhimurium | 47% id, 98% cov |
Q9PM78: ATP phosphoribosyltransferase (EC 2.4.2.17) from Campylobacter jejuni Q5HSJ4: ATP phosphoribosyltransferase (EC 2.4.2.17) from Campylobacter jejuni | 46% id, 98% cov |
HIS1_ECOLI / P60757: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Escherichia coli HisG / b2019: ATP phosphoribosyltransferase (EC 2.4.2.17) from Escherichia coli hisG / P60757: ATP phosphoribosyltransferase (EC 2.4.2.17) from Escherichia coli | 46% id, 98% cov |
Q9Z472: ATP phosphoribosyltransferase (EC 2.4.2.17) from Corynebacterium glutamicum | 37% id, 99% cov |
HIS1_MYCTU / P9WMN1: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Mycobacterium tuberculosis | 32% id, 99% cov |
HSERO_RS20350: ATP phosphoribosyltransferase (EC 2.4.2.17) from Herbaspirillum seropedicae | 32% id, 94% cov |
Ga0059261_1280: ATP phosphoribosyltransferase (EC 2.4.2.17) from Sphingomonas koreensis | 33% id, 91% cov |
AZOBR_RS19500: ATP phosphoribosyltransferase (EC 2.4.2.17) from Azospirillum brasilense | 32% id, 94% cov |
Q02129: ATP phosphoribosyltransferase (EC 2.4.2.17) from Lactococcus lactis | 29% id, 100% cov |
BPHYT_RS17715: ATP phosphoribosyltransferase (EC 2.4.2.17) from Burkholderia phytofirmans | 33% id, 87% cov |
SMc00917: ATP phosphoribosyltransferase (EC 2.4.2.17) from Sinorhizobium meliloti | 28% id, 99% cov |
G7JFL4: ATP phosphoribosyltransferase (EC 2.4.2.17) from Medicago truncatula | 30% id, 84% cov |
Q56UT2: ATP phosphoribosyltransferase (EC 2.4.2.17) from Odontarrhena lesbiaca | 31% id, 78% cov |
HIS1A_ARATH / Q9S762: ATP phosphoribosyltransferase 1, chloroplastic; ATP-PRTase 1; AtATP-PRT1; EC 2.4.2.17 from Arabidopsis thaliana AtATP-PRT1 / Q9S762: ATP-phosphoribosyl transferase (EC 2.4.2.17) from Arabidopsis thaliana Q9S762: ATP phosphoribosyltransferase (EC 2.4.2.17) from Arabidopsis thaliana | 31% id, 77% cov |
HIS1B_ARATH / Q8GSJ1: ATP phosphoribosyltransferase 2, chloroplastic; ATP-PRTase 2; AtATP-PRT2; EC 2.4.2.17 from Arabidopsis thaliana AtATP-PRT2 / Q8GSJ1: ATP-phosphoribosyl transferase (EC 2.4.2.17) from Arabidopsis thaliana | 31% id, 76% cov |
Q56US5: ATP phosphoribosyltransferase (EC 2.4.2.17) from Alyssum montanum | 30% id, 78% cov |
Q56UT3: ATP phosphoribosyltransferase (EC 2.4.2.17) from Odontarrhena lesbiaca | 29% id, 80% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
215052-215939 (frame +3) on 241 is similar to: | PaperBLAST |
HIS1_SALTY / P00499: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Salmonella typhimurium Also see hits to annotated proteins above | 46% id, 100% cov |
G7JFL4: ATP phosphoribosyltransferase (EC 2.4.2.17) from Medicago truncatula Also see hits to annotated proteins above | 29% id, 87% cov |
Q56UT2: ATP phosphoribosyltransferase (EC 2.4.2.17) from Odontarrhena lesbiaca Also see hits to annotated proteins above | 30% id, 79% cov |
HIS1A_ARATH / Q9S762: ATP phosphoribosyltransferase 1, chloroplastic; ATP-PRTase 1; AtATP-PRT1; EC 2.4.2.17 from Arabidopsis thaliana AtATP-PRT1 / Q9S762: ATP-phosphoribosyl transferase (EC 2.4.2.17) from Arabidopsis thaliana Q9S762: ATP phosphoribosyltransferase (EC 2.4.2.17) from Arabidopsis thaliana Also see hits to annotated proteins above | 30% id, 78% cov |
HIS1B_ARATH / Q8GSJ1: ATP phosphoribosyltransferase 2, chloroplastic; ATP-PRTase 2; AtATP-PRT2; EC 2.4.2.17 from Arabidopsis thaliana AtATP-PRT2 / Q8GSJ1: ATP-phosphoribosyl transferase (EC 2.4.2.17) from Arabidopsis thaliana Also see hits to annotated proteins above | 30% id, 78% cov |
Q56US5: ATP phosphoribosyltransferase (EC 2.4.2.17) from Alyssum montanum Also see hits to annotated proteins above | 29% id, 79% cov |
Q56UT3: ATP phosphoribosyltransferase (EC 2.4.2.17) from Odontarrhena lesbiaca Also see hits to annotated proteins above | 28% id, 81% cov |
More... |
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory