Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 120 curated entries in PaperBLAST's database that match '2.4.2.2'.

These curated entries have 82 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT4389: conserved hypothetical protein (NCBI ptt file)
is similar to:
PaperBLAST

PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron

100% id,
100% cov

PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.1; EC 2.4.2.28 from Unknown prokaryotic

39% id,
99% cov

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli
yfiH / P33644: purine nucleoside phosphorylase YfiH (EC 2.4.2.1; EC 2.4.2.28; EC 3.5.4.4; EC 1.10.3.2) from Escherichia coli

32% id,
92% cov

More...

BT0835: tRNA-guanine transglycosylase (NCBI ptt file)
is similar to:
PaperBLAST

tgt / Q183P1: preQ1 tRNA-ribosyltransferase (EC 2.4.2.29) from Clostridioides difficile

53% id,
94% cov

TGT_ECOLI / P0A847: Queuine tRNA-ribosyltransferase; Guanine insertion enzyme; tRNA-guanine transglycosylase; EC 2.4.2.29 from Escherichia coli
Tgt: tRNA-guanine transglycosylase (EC 2.4.2.29) from Escherichia coli
tgt / P0A847: tRNA-guanine transglycosylase (EC 2.4.2.29) from Escherichia coli
P0A847: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29) from Escherichia coli

48% id,
95% cov

Q54177: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29) from Shigella flexneri

48% id,
95% cov

More...

BT0427: xanthine phosphoribosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

XPT_BACSU / P42085: Xanthine phosphoribosyltransferase; XPRTase; EC 2.4.2.22 from Bacillus subtilis

49% id,
94% cov

XPT_ENTFA / Q831Y0: Xanthine phosphoribosyltransferase; XPRTase; EC 2.4.2.22 from Enterococcus faecalis

45% id,
99% cov

BT4386: hypoxanthine-guanine phosphoribosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

HGXR_TRIFO / P51900: Hypoxanthine-guanine-xanthine phosphoribosyltransferase; HGPRT; HGXPRT; HGXPRTase; EC 2.4.2.22; EC 2.4.2.8 from Tritrichomonas foetus

36% id,
95% cov

HGXR_PLAFG / P20035: Hypoxanthine-guanine-xanthine phosphoribosyltransferase; HGPRT; HGXPRT; HGXPRTase; EC 2.4.2.22; EC 2.4.2.8 from Plasmodium falciparum

31% id,
74% cov

Q8IJS1: xanthine phosphoribosyltransferase (EC 2.4.2.22); hypoxanthine phosphoribosyltransferase (EC 2.4.2.8) from Plasmodium falciparum

31% id,
74% cov

More...

BT4554: purine nucleoside phosphorylase II (NCBI ptt file)
is similar to:
PaperBLAST

Udp / b3831: uridine phosphorylase (EC 2.4.2.2; EC 2.4.2.3) from Escherichia coli
udp / P12758: uridine phosphorylase (EC 2.4.2.2) from Escherichia coli

29% id,
96% cov

TK1479 / Q5JJC1: uridine phosphorylase (EC 2.4.2.2) from Thermococcus kodakarensis

29% id,
85% cov

PNPH_SACS2 / P50389: Purine nucleoside phosphorylase; PNP; 5'-methylthioadenosine phosphorylase I; MTA phosphorylase I; MTAPI; EC 2.4.2.1; EC 2.4.2.28 from Saccharolobus solfataricus
P50389: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Saccharolobus solfataricus

33% id,
55% cov

BT1881: purine nucleoside phosphorylase I (NCBI ptt file)
is similar to:
PaperBLAST

Q9CQ65: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Mus musculus

28% id,
89% cov

MTAP_BOVIN / Q3MHF7: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPase; EC 2.4.2.28 from Bos taurus

30% id,
77% cov

MTAP_HUMAN / Q13126: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPase; EC 2.4.2.28 from Homo sapiens
MTAP / Q13126: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Homo sapiens
Q13126: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Homo sapiens

30% id,
77% cov

More...

BT3267: adenine phosphoribosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

XPT_ENTFA / Q831Y0: Xanthine phosphoribosyltransferase; XPRTase; EC 2.4.2.22 from Enterococcus faecalis

29% id,
78% cov

BT1316: putative NADH dehydrogenase/NAD(P)H nitroreductase (NCBI ptt file)
is similar to:
PaperBLAST

D7GJ95: aerobic 5,6-dimethylbenzimidazole synthase (EC 1.13.11.79); nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Propionibacterium freudenreichii

24% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory